BRACKETS	------(((-(-((((((-------((-(((-(-((------((-((((---------------))))--))-----))))))--))--((-(((-----((-((((((------))))-))))----))))-)------))))))---)-)))--------
Chlamydia trachomatis 1	--------C-U-UGGUGAUA-AU-AGA-GAG-A-GGGA-AACAC-CUGACA--CCAUUCCGAACUCAGAAGUUAAG-CCUCUG-AUCG-CU-GAUGGUA-CU-AUACACAAGA--GU---AUGGGAGAGUAG-GU-C-G-UCGCCA---A-GCAU-------
Chlamydophila pneumoniae 1	--------C-U-UGGCGAUA-CU-GGA-GAA-A-GGGA-UACAC-CUGAUA--CCAUUCCGAACUCAGAAGUUAAG-CCUUUU-AUCG-CU-GAUGGUA-CU-AUACACAAGA--GU---AUGGGAGAGUAA-GU-C-G-UUGCCA---A-GCUU-------
Chlamydia muridarum 1	--------C-U-UGGUGAUA-AU-AGA-GAG-A-GGGA-AACAC-CUGAUA--CCAUUCCGAACUCAGAAGUUAAG-CCUCUG-AUCG-CU-GAUGGUA-CU-AUACACAAGA--GU---AUGGGAGAGUAG-GU-C-G-UUGCCA---A-GC---------
Chlamydia muridarum 2	-------GC-U-UGGUGAUA-AU-AGA-GAG-A-GGGA-AACAC-CUGAUA--CCAUUCCGAACUCAGAAGUUAAG-CCUCUG-AUCG-CU-GAUGGUA-CU-AUACACAAGA--GU---AUGGGAGAGUAG-GU-C-G-UUGCCA---A-GCAUU------
Chlamydophila pneumoniae 2	-------GC-U-UGGCGAUA-CU-GGA-GAA-A-GGGA-UACAC-CUGAUA--CCAUUCCGAACUCAGAAGUUAAG-CCUUUU-AUCG-CU-GAUGGUA-CU-AUACACAAGA--GU---AUGGGAGAGUAA-GU-C-G-UUGCCA---A-GCUUU------
Chlamydophila caviae 1	-------GC-U-UGGUGAUA-AU-GGA-AAA-A-GGGA-CACAC-CUGACC--CCAUUCCGAACUCAGAAGUUAAG-CCUUUU-AUCG-CC-GAUGGUA-CU-AUACACAAGA--GU---AUGGGAGAGUAG-GU-C-G-UUGCCA---A-GCUUU------
Chlamydophila pneumoniae 3	----------U-UGGCGAUA-CU-GGA-GAA-A-GGGA-UACAC-CUGAUA--CCAUUCCGAACUCAGAAGUUAAG-CCUUUU-AUCG-CU-GAUGGUA-CU-AUACACAAGA--GU---AUGGGAGAGUAA-GU-C-G-UUGCCA---A-GCUUU------
Parachlamydia sp. 1	-------GU-U-UGGUGGCA-UU-AGA-GAA-A-GGGA-AAUAC-CUGAAC--CCAUUCCGAACUCAGAAGUCAAG-CCUUUC-AUCG-CC-GAUGGUA-CU-GCACACAAGA--GU---GUGGGAGAGUAG-GU-C-G-CCGCCA---A-ACU--------
Chlamydophila abortus 1	-------GC-U-UGGUGAUA-AU-GGA-AAA-A-GGGA-UACAC-CUGAUA--CCAUUCCGAACUCAGAAGUUAAG-CCUUUU-AUCG-CC-GAUGGUA-CU-AUACACAAGA--GU---AUGGGAGAGUAG-GU-C-G-UCGCCA---A-GCU--------
Candidatus Fritschea bemisiae 1	--------U-U-UGGUGACC-AU-AGA-GAA-G-UGGA-AACAC-CUGAUU--CCAUUCCGAACUCAGCAGUUAAG-CACUUC-AUCG-CC-GAUGGUA-CU-GUACACUAGA--GU---AUGGAAGAGUAG-GA-C-G-UCGCCA---A-AUCU-------
Dehalococcoides ethenogenes 1	-----UCCC-C-CGGUGGUU-AG-AGC-GGG-G-UGGU-ACCAC-CCGUUC--CCGUCCCGAACACGGUCGUGAAA-CGCCCC-AGCG-CA-GACGAUA-CU-UAGGAGGCAA--CUCC-UUGU--GGAAAA-UA-U-G-CCACUGCCCG-GGGA-------
Thermomicrobium roseum 1	-----CGUG-C-GCGUGGCCGAG-AGC-GGU-G-UGGC-AACAC-CCCGCU--CCAUCCCGAACCGGGUCGUGCCC-CACACC-AGCG-CCGGAGAGUA-CU-GCGCGGGCAA--CCGC-GUGGGAGGCGAG-GC-C-G-CUCGC----G-CGCACGGU---
Herpetosiphon aurantiacus 1	--------U-C-CGGUGGCA-AU-GUC-GGA-G-GGGU-CCCAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCCUCC-AGAG-CC-GAUGGUA-CU-CCGCGGGGAA--CCGC-GCGGGAGAGUAG-GU-C-G-CUGCCG---G-AU---------
Aquifex aeolicus 1	------CCC-C-UGGUGGCC-AU-AGC-GGG-G-GGGA-AACAC-CCGGUC--CCAUUCCGAACCCGGCAGUUAAG-CCCCCC-AGCG-CC-GAUGAUA-CU-GUGCCGGCAG--CGGC-ACGGGAAAGUAG-GU-C-G-CUGCCA---G-GGG--------
Deinococcus radiodurans 1	----A-ACC-C-CCGCGCCC-AU-AGC-ACU-G-UGGA-ACCAC-CCCACC--CCAUGCCGAACUGGGUCGUGAAA-CACAGC-AGCG-CC-AAUGAUA-CU-GGGCCCGCAG--GGCC-CCGGAAAAGUCG-GU-C-A-GCGCGG---G-GGCU-------
Deinococcus radiodurans 3	----AUACC-C-CCGUGCCU-UU-AGC-GCC-U-CGGA-ACCAC-CCCACU--CCAUGCCGAACUGGGUCGUGAAA-CGUGGC-AGCG-CC-UAUGAUA-CU-UGGACCGCAG--GGUC-CUGGAAAAGUCG-GUGC-A-GUGCGG---G-GGUUU------
Deinococcus radiophilus 1	----AUACC-C-CCGUGCCG-UG-AGC-GCC-U-CGGA-ACCAC-CCCACU--CCAUGCCGAACUGGGUCGUGAAA-CGUGGC-AGCG-CC-UAUGAUA-CU-UGGACCGCAG--GGUC-CUGGGAAAGUCG-GUGC-A-GUGCGG---G-GGUUU------
Thermus sp. 1	-------UC-C-UCGGGACC-AU-AGC-GGA-G-GGGA-AACAC-CCGGUUU-CCAUUCCGAACCCGGCAGUUAAG-CCCUCC-AGCG-CC-GAUGAUA-CU-GUGCCGGGCGAACGGC-ACGGGAAAGUAG-GU-C-G-UCCCGG---G-GGUU-------
Thermus sp. 2	-------CU-C-GGACCACC-AU-ACC-GGG-G-GGGA-AACAC-CCGGUC--CCAUUCCGAACCCGGAAGUUAAG-CCCCCC-AGGG-CC-GAUGAUA-GC-CUCGC-CCCGA--GCG-AGGUGAAAGUAG-GU-C-G-UGGUCC---G-GGCAC------
Deinococcus radiodurans 2	----ACACC-C-CCGUGCCC-AU-AGC-ACU-G-UGGA-ACCAC-CCCACC--CCAUGCCGAACUGGGUCGUGAAA-CACAGC-AGCG-CC-AAUGAUA-CU-CGGACCGCAG--GGUC-CCGGAAAAGUCG-GU-C-A-GCGCGG---G-GGUUU------
Thermus thermophilus 1	------UCC-C-CCGUGCCC-AU-AGC-GGC-G-UGGA-ACCAC-CCGUUC--CCAUUCCGAACACGGAAGUGAAA-CGCGCC-AGCG-CC-GAUGGUA-CU-GGGCGGGCGA--CCGC-CUGGGAGAGUAG-GU-C-G-GUGCGG---G-GGAUU------
Thermus thermophilus 2	----AAUCC-C-CCGUGCCC-AU-AGC-GGC-G-UGGA-ACCAC-CCGUUC--CCAUUCCGAACACGGAAGUGAAA-CGCGCC-AGCG-CC-GAUGGUA-CU-GGGCGGGCGA--CCGC-CUGGGAGAGUAG-GU-C-G-GUGCGG---G-GGA--------
Thermus thermophilus 3	----AAUCC-C-CCGUGCCC-AU-AGC-GGC-G-UGGA-ACCAC-CCGUUC--CCAUUCCGAACACGGAAGUGAAA-CGCGCC-AGCG-CC-GAUGGUA-CU-GGCGG-ACGA---CCG-CUGGGAGAGUAG-GU-C-G-GUGCGG---G-GGA--------
Thermus aquaticus 1	----A-AUC-C-CCGC--CC-UU-AGC-GGC-G-UGGA-AC-AC-CCGUUC--CCAUUCCGAACACGGAAGUGAAA-CGCGCC-AGCG-CC-GAUGGUCACU-GGGACCGCAG--GGUC-CU-GGAGAGUAG-GUGCUG-GUGCGG---G-GAU--------
Acholeplasma laidlawii 1	--------U-C-UGGUGACG-AUAGGU-AAG-A-UGG--UUCAC-CUGUUC--CCAUCCCGAACACAGAAGUUAAG-CAUCUU-AGCG-CC-GACGAUA-GU-UAUU--ACA-----AU-UAGCGAAAAUAG-GA-C-G-UUGCCA---G-GC---------
Acholeplasma laidlawii 2	--------U-C-UGGUGACG-AU-GGC-AAG-A-UGU--UCCAC-CUGUUC--CCUACCCGAAUAUAGAAGUUAAG-CAUCUU-AGCG-CC-GACGAUA-GU-UAUU--ACA-----AU-UAGCGAAAAUAG-GA-C-G-UUGCCA---G-GC---------
Acholeplasma laidlawii 3	--------U-C-UGGUGACG-AU-GGC-AAG-A-UGGU-UCCAC-CUGUUC--CCAUCCCGAACACAGAAGUUAAG-CAUCUU-AGCG-CC-GACGAUA-GU-UAUU--ACA-----AU-UAGCGAAAAUAG-GA-C-G-UUGCCA---G-GC---------
Acholeplasma modicum 1	----------W-UGGUGACG-AU-GGC-GAA-G-UGGA-UCCAC-CUGUUC--CCAUCUCGAACACAGAAGUUAAG-CACUUC-AGCG-UC-GAAAAUA-GU-CC----UAAG-------GGGCGAAGAUAG-AA-C-G-UUGCCA---G-GC---------
Amphibacillus xylanus 1	--------C-U-UCGUGACA-AU-AGC-GAA-G-AGGU-CACAC-CUGUUC--CCAUACCGAACACAGAAGUCAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGGUUUU--CCCC-CUGCGAGAGUAG-GA-C-G-UCGCUA---A-G----------
Bacillus amyloliquefaciens 1	--------U-C-UGGUGACU-AU-AGC-GGA-G-GGGC-AACAC-CCGUAC--CCAUCCCGAACACGGACGUGAAG-ACCUCC-AGCG-CC-GAGAAUA-CU-GGGAGGGCAG--CCUC-CUGGGAAAGUAG-GU-C-G-UUGCCA---G-GC---------
Bacillus anthracis 1	--------U-U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GC---------
Bacillus anthracis 10	--------U-C-UGGUAAUG-AU-GGC-AGA-G-AGGC-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GCAAA------
Bacillus anthracis 2	--------U-C-UGGUAAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Bacillus anthracis 3	--------U-C-UGGUAAUG-AU-GGC-AGA-G-AGGC-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Bacillus anthracis 4	--------U-U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GCAAC------
Bacillus anthracis 5	--------U-C-UGGUAAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GCUAA------
Bacillus anthracis 6	--------U-U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GCUAU------
Bacillus anthracis 7	--------U-U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GCAAG------
Bacillus anthracis 8	--------U-U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GCAAA------
Bacillus anthracis 9	--------U-C-UGGUAAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GCAAU------
Bacillus cereus 1	--------U-U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-G----------
Bacillus cereus 10	----------C-UGGUAAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GCAUCACCAUU
Bacillus cereus 11	--------U-C-UGGUAAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Bacillus cereus 2	--------U-U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GC---------
Bacillus cereus 4	--------U-C-UGGUAAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GCAAA------
Bacillus cereus 5	----------U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GCAAC------
Bacillus cereus 6	------------UGGUAAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Bacillus cereus 7	----------U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GCUAU------
Bacillus cereus 8	----------U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GCAAG------
Bacillus cereus 9	----------U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GCAAA------
Bacillus clausii 1	--------U-C-CGGUGACA-AU-GGC-AAA-G-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGCCGUUAAG-CUCUUU-UGCG-CC-GAUGGUA-GU-UGGAGGCUU---CCUC-CCGCGAGAGUAG-GA-C-G-UUGCCG---G-GC---------
Bacillus clausii 2	--------U-C-CGGUGACA-AU-GGC-AAA-G-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGCCGUUAAG-CUCUUU-UGCG-CC-GAUGGUA-GU-UGGAGGCUU---CCUC-CUGCGAGAGUAG-GA-C-G-UUGCCG---G-GC---------
Bacillus clausii 3	--------U-C-CGGUGACA-AU-GGC-AAA-G-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGCCGUUAAG-CUCUUU-UGCG-CC-GAUGGUA-GU-UGGAGGCUU---CCUC-CUGUGAGAGUAG-GA-C-G-UUGCCG---G-GC---------
Bacillus firmus 1	--------U-C-UGGUGGCG-AU-AGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUUCUC-AGCG-CC-GAUGGUA-GU-UAGGGGCUG---UCCC-CUGUGAGAGUAG-GA-C-G-CUGCCA---G-GC---------
Bacillus halodurans 1	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGUCGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGCCUU---GCCC-CUGCGAGAGUAG-GA-C-G-CUGCCA---A-GC---------
Bacillus halodurans 2	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGC-CACAC-CCGUUC--CCAUGCCGAACACGGUCGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGGCUU---CCCC-CUGCGAGAGUAG-GA-C-G-CUGCCA---A-AC---------
Bacillus halodurans 3	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGC-CACAC-CCGUUC--CCAUGCCGAACACGGUCGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGGCUU---CCCC-CUGCGAGAGUAG-GA-C-G-CUGCCA---A-GC---------
Bacillus halodurans 4	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGC-CACAC-CCGUUC--CCAUGCCGAACACGGUCGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGCCUU---GCCC-CUGCGAGAGUAG-GA-C-G-UUGCCA---A-GC---------
Bacillus halodurans 5	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGC-CACAC-CCGUUC--CCAUGCCGAACACGGUCGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGACUU---CCCC-CUGCGAGAGUAG-GA-C-G-CUGCCA---A-GC---------
Bacillus halodurans 6	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGC-CACAC-CCGUUC--CCAUGCCGAACACGGUCGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGGCUU---CCCC-CUGCGAGAGUAG-GA-C-G-CUGCCA---A-G----------
Bacillus licheniformis 5	----------U-UGGUGGCG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGGCUU---CCCC-CUGUGAGAGUAG-GA-C-G-CCGCCA---A-GCG--------
Bacillus licheniformis 6	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGGCUU---CCCC-CUGUGAGAGUAG-GA-C-G-CCGCCA---A-G----------
Bacillus megaterium 1	--------U-C-UGGUGGCG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUUU-AGCG-CC-AAUGGUA-GU-UGGGACUUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Bacillus megaterium 2	--------U-C-UGGUGGCG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUUU-AGCG-CC-GAUGGUA-GU-UGGGACUUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Bacillus methanolicus 1	--------Y-Y-UGGUGGCG-AU-GGC-GAG-A-AGGU-CACAC-CCGUUC--CCAURCCGAACACGGAAGUUAAG-CUUCUC-AGCG-CC-GAUGGUA-GU-UGGGGCAUU---GCCC-CUGCGAGAGUAG-GA-C-G-CUGCCA---G-GC---------
Bacillus subtilis 4	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-CGGGGGUUU---CCCC-CUGUGAGAGUAG-GA-C-G-CCGCCA---A-GC---------
Bacillus subtilis 5	----------U-UGGUGGCG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-CGGGGGUUU---CCCC-CUGUGAGAGUAG-GA-C-G-CCGCCA---A-GC---------
Bacillus thuringiensis 1	----------U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GCAAC------
Bacillus thuringiensis 2	------------UGGUAAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Bacillus thuringiensis 3	----------U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GCUAU------
Bacillus thuringiensis 4	----------U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GCAAG------
Bacillus thuringiensis 5	----------U-UGGUGAUG-AU-GGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UCGCCA---A-GCAAA------
Bacillus thuringiensis 6	------------UGGUAAUG-AU-GGC-AGA-G-AGGC-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUCU-AGCG-CC-GAUGGUA-GU-UGGGACCUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Bacillus licheniformis 1	--------U-C-UGGUGAUG-AU-GGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGGCUU---CCCC-CUGCGAGAGUAG-GA-C-A-UCGCCA---G-GC---------
Bacillus licheniformis 2	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGGCUU---CCCC-CUGUGAGAGUAG-GA-C-G-CCGCCA---A-GC---------
Bacillus methanolicus 10	--------Y-Y-UGGUGGCG-AU-GGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGAAGUUAAG-CUUCUC-AGCG-CC-GAUGGUA-GU-UGGGGCAUU---GCCC-CUGCGAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Bacillus methanolicus 2	--------Y-Y-UGGUGGCG-AU-GGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAGGUUAAG-CUUCUC-AGCG-CC-GAUGGUA-GU-UGGGGCAUU---GCCC-CUGCGAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Bacillus methanolicus 3	--------Y-Y-UGGUGGCG-AU-GGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAGGUUAAG-CUUCUC-AGCG-CC-GAUGGUA-GU-UGGGGCAUU---GCCC-CUGYGAGAGUAG-GA-C-G-CUGCCA---G-GC---------
Bacillus methanolicus 4	--------Y-Y-UGGUGGCG-AU-GGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGAGGUUAAG-CUUCUC-AGCG-CC-GAUGGUA-GU-UGGGGCAUU---GCCC-CUGCGAGAGUAG-GA-C-G-CUGCCA---G-GC---------
Bacillus methanolicus 5	--------Y-Y-YGGUGGAU-UA-GGC-GAA-G-AGGU-UACAC-CCGUUC--CCAUCCCGAACACAGCCGAGAAA-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGGUCU---CCCC-CUGUGAGAGCAG-GA-C-G-CCGCUC---G-GG---------
Bacillus methanolicus 6	--------Y-Y-UGGUGGCG-UU-GGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGAAGUUAAG-CUUCUC-AGCG-CC-GAUGGUA-GU-UGGGGCAUU---GCCC-CUGCGAGAGUAG-GA-C-G-CUGCCA---G-GC---------
Bacillus methanolicus 7	--------C-C-UGGUGGCG-AU-GGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUUCUC-AGCG-CC-GAUGGUA-GU-UGGGGCAUU---GCCC-CUGCGAGAGUAG-GA-C-G-CUGCCA---G-GC---------
Bacillus methanolicus 8	--------C-C-UGGUGGCG-AU-GGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUUCUC-AGCG-CC-GAUGGUA-GU-UGGGGCAUU---GCCC-CUGCGAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Bacillus methanolicus 9	--------C-C-UGGUGGCG-AU-GGC-GAG-A-AGGA-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUUCUC-AGCG-CC-GAUGGUA-GU-UGGGGCAUU---GCCC-CUGCGAGAGUAG-GA-C-G-CUGCCA---G-GC---------
Bacillus sp. 1	--------U-C-UGGUGAUG-AU-GGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-CGGGGGCUU---CCCC-CUGUGAGAGUAG-GA-C-A-UCGCCA---G-GC---------
Bacillus sp. 2	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-CGGGGGUUU---CCCC-CUGUGAGAGUAG-GA-C-G-CCGCCA---A-GC---------
Bacillus subtilis 1	--------U-C-UGGUGAUG-AU-GGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-CGGGGGUUU---CCCC-CUGUGAGAGUAG-GA-C-A-UCGCCA---G-GC---------
Bacillus subtilis 2	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-CGGGGGUUU---CCCC-CUGUGAGAGUAG-GA-C-G-CCGCCA---A-GC---------
Bacillus subtilis 6	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGUAGUUAAG-CUCUUC-AGCG-CC-GAUGGUG-AG-UGGGGGCUU---CCCC-CUGUGAGAGUAG-GA-C-G-CCGCCA---A-GC---------
Brevibacillus brevis 1	--------U-C-UGGUGAUG-AU-GGC-GGA-G-GGGA-CACAC-CCGUUC--CCAUACCGAACACGGCCGUUAAG-CCCUCC-AGCG-CC-AAUGGUA-CU-UGCUCCGCAG--GGAG-CCGGGAGAGUAG-GA-C-G-UCGCCA---G-GC---------
Candidatus Phytoplasma asteris 1	--------C-U-UGGUGCAU-AA-AAC-UAA-G-GGGC-AACAC-CUGUUC--CCAUCCCGAACACAGCAGUUAAG-UCCUUA--GUA-CU-GACAAUA-GU-UC----UUUAUU-----GAGCGAAGAUAG-GG-A-G-U-GCCA---A-GG---------
Clostridium acetobutylicum 1	--------U-C-CGGUGACC-AU-AGC-UUG-G-UUGU-AACAC-CCGUUC--CCAUACCGAACACGAAGGUUAAG-AACCAA-AGCG-CC-GAUGGUA-CU-GCAGGGGCAG--CCCU-GUGGGAGAGUAG-GU-C-A-UUGCCG---G-GU---------
Clostridium acetobutylicum 2	--------U-C-CGGUGACU-AU-AGC-UUG-G-UUGU-AACAC-CCGUUC--CCAUACCGAACACGAAGGUUAAG-AACCAA-AGCG-CC-GAUGGUA-CU-GCAGGGGCAG--CCCU-GUGGGAGAGUAG-GU-C-A-UUGCCG---G-GU---------
Clostridium acetobutylicum 3	--------U-C-CGGUGAUC-AU-AGC-UUG-G-UUGU-AACAC-CAGUUC--CCAUACCGAACACGAAGGUUAAG-AACCAA-AGCG-CC-GAUGGUA-CU-GCAGGGGCAA--CCGU-GUGUCAAAUGAG-GU-C-A-UUGCCG---G-GU---------
Clostridium acetobutylicum 4	--------U-C-CGGUGACU-AU-AGC-UUG-G-UUGU-AACAC-CCGUUC--CCAUACCGAACACGAAGGUUAAG-AACCAA-AGCG-CC-GAUGGUA-CU-GCAGGGGCAG--CCCU-GUGGGACAGUAG-GU-C-A-UUGCCG---G-GU---------
Clostridium acetobutylicum 5	--------U-C-CGGUGACC-AU-AGC-UUG-G-UUGU-AACAC-CCGUUC--CCAUACCGAACACGAAGGUUAAG-AACCAA-AGCG-CC-GAUGGUA-CU-GCAGGGGCAG--CCCU-GUGGGACAGUAG-GU-C-A-UUGCCG---G-GU---------
Clostridium pasteurianum 1	--------U-C-CAGUGUCU-AU-GAC-UUA-G-AGGU-AACAC-UCCUUC--CCAUUCCGAACAGGCAGGUUAAG-CUCUAA-UGUG-CU-GAUGGUA-CU-GCAGGGGAAG--CCCU-GUGGAGAAGUAG-GU-C-G-ACGCUG---G-GU---------
Clostridium bifermentans 1	--------D-G-UGGUUAUU-AC-AGC-AAA-G-AGGA-UACAC-CUGUUC--CCAUUCCGAACACAGAAGUUAAG-CUCUUU-AGCG-CC-GAUGGUA-CU-UGGUGGGAAG--CUGC-CUGGGAGAGUAG-GA-C-G-UAGCCG---C-GU---------
Clostridium butyricum 1	--------U-C-UGGUGAUG-AU-GGC-AUA-G-AGGU-AACAC-UCCUUC--CCAUUCCGAACAGGACAGUUAAG-GUCUAU-AGCG-CC-GAUGGUA-CU-GCAUGGGAGA--CUGU-GUGGAAGAGUAG-GA-C-G-UCGCCA---G-GU---------
Clostridium butyricum 2	--------U-C-UGGUGAUG-AU-GGC-AUA-G-AGGU-AACAC-UCCUUU--CCAUUCCGAACAGGACAGUUAAG-GUCUAU-AGCG-CC-GAUGGUA-CU-GCAUGGGAGA--CUGU-GUGGAAGAGUAG-GA-C-G-UCGCCA---G-GU---------
Clostridium carnis 1	--------C-C-UAGUGAUG-AU-GGC-GUA-G-AGGA-AACAC-UCCUUU--CCAUUCCGAACAGGACAGUUAAG-CUCUAC-AGCG-UC-GAUGGUA-CU-GCACGGGUGA--CUGU-GUGGGAGAGUAG-AA-C-G-UUGCUA---G-GU---------
Clostridium innocuum 1	--------U-C-UGGUGGCG-AU-AGC-GAU-G-UGGA-UACAC-CUGUUC--UCAUCCCGAACACAGAAGUUAAG-CAUAUC-AGCG-GC-GACAAUA-UC-UGGA--CUGGC---UC-CAGUGAAGAUAG-CA-C-G-CUGCCA---G-GU---------
Clostridium tyrobutyricum 1	--------D-C-AGGUGGUG-AU-GGC-GGA-A-AGGU-CACAC-CCGAAC--ACAUCCCGAACUCGGAAGUUAAG-CUUUCC-AGCG-CC-GAUGGUA-GU-UGGGGGUUU---CCCC-CUGCGAGAGUAG-GA-C-G-UUGCCG---G-GC---------
Clostridium tyrobutyricum 2	--------D-C-AGGUGGCG-AU-GGC-GGA-A-AGGU-CACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CUUUCC-AGCG-CC-GAUGGUA-GU-UGGGGGUCU---CCCC-CUGCGAGAGUAG-GA-C-G-CUGCCG---G-GC---------
Clostridium tyrobutyricum 3	--------D-C-AGGUGGCG-AU-GGC-GGA-A-AGGU-CACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CUUUCC-AGCG-CC-GAUGGUA-GU-UGGGGGUCU---CCCC-CUGCGAGAGUAG-GA-C-G-UUGCCG---G-GC---------
Clostridium tyrobutyricum 4	--------U-C-AGGUGGCG-AU-GGC-GGA-A-AGGU-CACAC-CCGAAC--ACAUCCCGAACUCGGAAGUUAAG-CUUUCC-AGCG-CC-GAUGGUA-GU-UGGGGGUUU---CCCC-CUGCGAGAGUAG-GA-C-G-CUGCCG---G-GC---------
Enterococcus faecalis 1	--------U-G-UGGUGGCG-AU-AGC-GAG-A-AGGA-UACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUUCUU-AGCG-CC-GAUUGUA-GU-GAAGGGUUU---CCCU-UUGUGAGAGUAG-GA-C-G-UCGCCA---C-GC---------
Colwellia hadaliensis 1	------UGU-U-UAGCGACC-AU-AGC-GCU-G-UGGC-CCCAC-CUGAUC--CCAUUCCGAACUCAGCAGUGAAA-CGCAGU-UGCG-CC-GAUGGUA-GU-GUGGG-AGUU---CCC-AUGUGAGAGUAG-GA-C-A-UCGUUA---A-ACAU-------
Enterococcus faecalis 2	--------U-G-UGGUGGCG-AU-AGC-GAG-A-AGGA-UACAC-CUGUAA--CCAUGCCGAACACAGAAGUUAAG-CUUCUU-AGCG-CC-GAUUGUA-GU-GAGGGGGUUG--CCCC-UUGUGAGAGUAG-GA-C-G-UCGCCA---C-GC---------
Erysipelothrix rhusiopathiae 1	--------U-C-UGGUGAUU-UU-AGC-GAA-G-UGGU-CACAC-CUGUUC--CCAUCUCGAACACAGAAGUUAAG-CACUUU-AGCG-GC-GACAAUA-UC-UAGC--CACGC---GC-UAGUGAAGAUAG-UU-C-A-UCGCCA---G-GU---------
Erysipelothrix rhusiopathiae 2	--------U-C-UGGUGAUU-UU-AGC-GAA-G-UGGU-CACAC-CUGUUC--CCAUCUCGAACACAGAAGUUAAG-CACUUU-AGCG-GC-GACAAUA-UC-UAGC--CACGC---GC-UAGUGAAGAUAG-UU-C-A-UUGCCA---G-GU---------
Erysipelothrix rhusiopathiae 3	--------U-C-UGGUGGUU-UU-AGC-GAA-G-UGGU-CACAC-CUGUUC--CCAUCUCGAACACAGAAGUUAAG-CACUUU-AGCG-GC-GACAAUA-UC-UAGC--CAAGC---GC-UAGUGAAGAUAG-UU-C-A-UCGCCA---G-GU---------
Erysipelothrix tonsillarum 1	--------U-C-UGGUGAUU-UG-AGC-GAA-G-UGGU-CACAC-CUGUUC--CCAUCUCGAACACAGAAGUUAAG-CACUUU-AGCG-GC-GACAAUA-UC-UAGC--CACGC---GC-UAGUGAAGAUAG-UU-C-A-UUGCCA---G-GU---------
Finegoldia magna 1	--------U-A-UGGUGAUA-AA-AGC-AAG-A-GGGA-UACAC-CUGUAC--CCAUGCCGAACACAGAAGUUAAG-CCUCUU-AACG-CC-GAUGGUA-CU-ACGAUGGAAA--CGUC-GUGGGAGAGUAG-GU-A-G-UCGCCA---A-AC---------
Finegoldia magna 2	----------A-UGGUGAUA-AA-AGC-AAG-A-GGGA-UACAC-CUGUAC--CCAUGCCGAACACAGAAGUUAAG-CCUCUU-AACG-CC-GAUGGUA-CU-ACGAUGGAAA--CGUC-GUGGGAGAGUAG-GU-A-G-UCGCCA---A-ACA--------
Geobacillus kaustophilus 1	--------C-C-UAGUGGCU-AU-GGC-GGA-G-GGGA-AACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCCUCC-AGCG-CC-GAUGGUA-GU-UGGGGCCAGC--GCCC-CUGCAAGAGUAG-GU-C-G-UUGCUA---G-GC---------
Geobacillus kaustophilus 2	--------C-C-UAGUGGCU-AU-GGC-GGA-G-GGGA-AACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCCUCC-AGCG-CC-GAUGGUA-GU-UGGGGCCAGC--GUCC-CUGCAAGAGUAG-GU-C-G-CUGCUA---G-GC---------
Geobacillus kaustophilus 3	------------UAGUGGCU-AU-GGC-GGA-G-GGGA-AACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCCUCC-AGCG-CC-GAUGGUA-GU-UGGGGCCAGC--GCCC-CUGCAAGAGUAG-GU-C-G-CUGCUA---G-GC---------
Geobacillus kaustophilus 4	-------GC-C-UAGUGGCU-AU-GGC-GGA-G-GGGA-AACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCCUCC-AGCG-CC-GAUGGUA-GU-UGGGGCCAGC--GCCC-CUGCAAGAGUAG-GU-C-G-CUGCUA---G-G----------
Geobacillus kaustophilus 6	--------C-C-UAGUGGCU-AU-GGC-GGA-G-GGGA-AACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCCUCC-AGCG-CC-GAUGGUA-GU-UGGGGCCAGC--GCCC-CUGCAAGAGUAG-GU-C-G-CUGCUA---G-GC---------
Geobacillus kaustophilus 7	--------------GUGGUG-AU-AGC-GGA-G-GGGA-AACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCCUCC-AGCG-CC-GAUGGUA-GU-UGGGGCCAGC--GCCCCUGCAAG-AGUAG-GU-C-G-CUGCUA---G-GC---------
Geobacillus stearothermophilus 1	--------C-C-UAGUGGUG-AU-AGC-GGA-G-GGGA-AACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCCUCC-AGCG-CC-GAUGGUA-GU-UGGGGCCAGC--GCCC-CUGCAAGAGUAG-GU-C-G-CUGCUA---G-GC---------
Geobacillus stearothermophilus 3	--------C-C-UAGUGACA-AU-AGC-GGA-G-AGGA-AACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CUCUCC-AGCG-CC-GAUGGUA-GU-UGGGGCCAGC--GCCC-CUGCAAGAGUAG-GU-C-G-UUGCUA---G-GC---------
Lactobacillus acidophilus 1	----------A-CGGUGGCG-AA-AGC-AAG-A-AGGA-UACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUUCUU-AACG-CC-GAAAGUA-GU-UGGUGGGCAA--CUGC-CUGCGAGGAUAG-GA-A-G-CUGCCG---U-GCU--------
Geobacillus stearothermophilus 2	--------C-C-UAGUGGUG-AU-AGC-GGA-G-GGGA-AACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCCUCC-AGCG-CC-GAUGGUA-GU-UGGGGCCAGC--GCCC-CUGCAAGAGUAG-GC-C-G-CUGCUA---G-GC---------
Geobacillus stearothermophilus 4	--------C-C-UAGUGACA-AU-AGC-GAG-A-GAGGAAACAC-CCGUCU--CCAUCCCGAACACGAAGGUUAAGCUCUCCC-AGCG-CC-GAUGGUA-GU-UGGGGCCAGC--GCCC-CUGCAAGAGUAG-GU-U-G-UCGCUA---G-GC---------
Lactobacillus brevis 1	--------U-G-UGGUGGCG-AU-AGC-CUG-A-AGGA-UACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUUCAG-CACG-CC-GAUAGUA-GU-UGGGGGAUCG--CCCC-CUGCGAGGAUAG-GA-C-G-UUGCCA---C-GC---------
Lactobacillus delbrueckii 1	--------U-G-CGGUGGCA-AU-GGC-AAU-A-AGGA-UACAC-CUGUUC--CCAUGCCGAACACAGUAGUUAAG-CUUCUU-AACG-CC-GAAAGUA-GU-UGGUGGGAAA--CUGC-CUGCGAGGAUAG-GA-A-G-CUGCCG---C-GC---------
Lactobacillus delbrueckii 2	--------U-G-CGGUGGCA-AU-GGC-AAG-A-AGGA-UACAC-CUGUUC--CCAUGCCGAACACAGUAGUUAAG-CUUCUU-AACG-CC-GAAAGUA-GU-UGGUGGGAAA--CUGC-CUGCGAGGAUAG-GA-A-G-CUGCCG---C-GC---------
Lactobacillus johnsonii 1	------------CGGUGGCG-AU-GGC-AAG-A-AGGA-UACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUUCUU-AACG-CC-GAGAGUA-GU-UGGUGGGAAA--CUGC-CUGCGAGGGUAG-GC-A-G-UCGCCG---U-GCU--------
Lactococcus lactis 2	--------U-U-UGGUCAUC-AU-UGC-GAU-G-GAGA-UACAC-CUGUUC--CCAUGUCGAACACAGAAGUUAAG-UCCAUC-UACG-GC-GGAAGUA-CU-UGGGGGUUG---CCCC-CU-GGGAGAUAGGCG-A-G-UGGCCA---A-GU---------
Lactobacillus plantarum 1	--------U-G-UGGUGACG-AU-GGC-GAG-A-AGGA-UACAC-CUGUUC--CCAUGUCGAACACAGAAGUUAAG-CUUCUU-AGCG-CC-GAGAGUA-GU-UGGGGGAUCG--CUCC-CUGCGAGGGUAG-GA-C-G-UUGCCA---U-GCGA-------
Lactobacillus plantarum 2	--------U-G-UGGUGACG-AU-GGC-GAG-A-AGGA-UACAC-CUGUUC--CCAUGUCGAACACAGAAGUUAAG-CUUCUU-AGCG-CC-GAGAGUA-GU-UGGGGGAUCG--CUCC-CUGCGAGGGUAG-GA-C-G-UUGCCA---U-GCAA-------
Lactobacillus plantarum 3	--------U-G-UGGUGACG-AU-GGC-GAG-A-AGGA-UACAC-CUGUUC--CCAUGUCGAACACAGAAGUUAAG-CUUCUU-AGCG-CC-GAGAGUA-GU-UGGGGGAUCG--CUCC-CUGCGAGGGUAG-GA-C-G-UUGCCA---U-GC---------
Lactococcus lactis 1	--------U-U-UGGUCAUC-AU-UGC-GAU-G-GAGA-UACAC-CUGUUC--CCAUGUCGAACACAGAAGUUAAG-UCCAUC-UACG-GC-GGAAGUA-CU-UGGGGGUUG---CCCC-CUGGGAGAUAGG-CG-A-G-UGGCCA---A-GU---------
Lactococcus lactis 3	-------UU-U-UGGUCAUC-AU-UGC-GAU-G-GAGA-UACAC-CUGUUC--CCAUGUCGAACACAGAAGUUAAG-UCCAUC-UACG-GC-GGAAGUA-CU-UGGGGGUUG---CCCC-CUGGGAGAUAUG-CG-A-G-UGGCCA---A-GU---------
Lactococcus lactis 4	--------U-U-UGGUAUUU-AU-UGC-AUA-G-GAGA-UAUAC-CUGUUC--CCAUGUCGAACACAGAAGUCAAG-UCCUUU-UGCG-CU-GGAAGUA-CU-UGGGGGUUG---CCCC-CUGGGAGAUAAA-GA-C-G-AUGCCA---A-GU---------
Lactococcus lactis 5	--------U-U-UGGUCAUC-AU-UGC-GAU-G-GAGA-UACAC-CUGUUC--CCAUGUCGAACACAGAAGUUAAG-UCCAUC-UACG-GC-GGAAGUA-CU-UGGGGGUUG---CCCC-CUGGGAGAUAUG-CG-A-G-UGGCCA---A-GU---------
Leuconostoc mesenteroides 1	--------U-G-UCGUGUCG-AU-AGC-AUA-G-AGGA-CACAC-CUGUUC--CCAUACCGAACACAGAAGUUAAG-CUCUAU-AGCG-CC-GAAAGUA-GU-UGGAGGAUCG--CUUC-CUGCGAGGAUAG-GA-C-G-AUGCGA---C-AG---------
Listeria innocua 2	--------U-C-UGGUAGUU-AU-GGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUCCCGAACACGGUAGUUAAG-CUUCUC-UGCG-CC-AAUGGUA-GU-UGGGGGCUU---CCCC-CUGCGAGAGUAG-GU-C-G-CUGCCG---G-GC---------
Listeria ivanovii 1	--------U-C-UGGUAGUU-AU-GGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUCCCGAACACGGUAGUUAAG-CUUCUC-UGCG-CC-AAUGGUA-GU-UGGGGGCUU---CCCC-CUGCGAGAGUAG-GU-C-G-CUGCCG---G-GC---------
Listeria monocytogenes 2	--------U-C-UGGUAGUU-AU-GGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUCCCGAACACGGUAGUUAAG-CUUCUC-UGCG-CC-AAUGGUA-GU-UGGGGGCUU---CCCC-CUGCGAGAGUAG-GU-C-G-CUGCCG---G-GC---------
Listeria monocytogenes 3	------------UGGUAGUU-AU-GGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUCCCGAACACGGUAGUUAAG-CUUCUC-UGCG-CC-AAUGGUA-GU-UGGGG-GCUU---CCC-CAGCGAGAGUAG-GU-C-G-CUGCCG---G-GCA--------
Loofah witches'-broom phytoplasma 1	--------C-U-UGGUUAUU-AA--UA-AAA-G-GGGA-AACAC-CUGUUC--CCAUUCCGAAUACAGAAGUUAAG-UCCUUU--UACCUC-GACAAUA-GU-UGUUG-UUUA---CAU-CCGCAAAGAUAG-AG-U---UAGCCA---A-GG---------
Mycoplasma capricolum 1	----------U-UGGUGGU--AU-AGC-AUA-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCUAU-UACG-GU-GAAGAUA-UU-AC----UGAU-------GUGAGAAAAUAG-CA-A-G-CUGCCA---G-UU---------
Mycoplasma flocculare 1	-------CA-A-GAGUAACA-AU-AGC-AAA-A-GGGA-UCA-C-CUGAUA--CCAUUCCGAACUCAGUAGUUAAG-CCUUUU-UACG-CC-GAAAAUA-CU-A-----GAAA--------UAGGAAAAUAG-GA-A-G-UUACUC---U-UU---------
Mycoplasma gallisepticum 1	--------U-G-UGAUAUCG-AU-AUC-GUG-A-UGGA-AACAC-CUGGUC--CCAUUCCGAACCCAGAAGUUAAG-CGUUAUCGGAG-CC-AAAGGUU-GC-------GCAA---------GCAAGAAUAGGGA-A-A-AUAUCA---C-GC---------
Mycoplasma haemofelis 1	------GAC-U-UGGUGGUU-AU-GGC-GGA-G-UGAA-UGCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-CGCUCC-AGCG-CU-GAUGGUA-CU-UCGCC-UCAA---GGC-ACGGGAGAGUAA-GU-C-G-CUGCCA---G-GUCU-------
Mycoplasma genitalium 1	---------------UGCUA-AU-AUC-GCU-G-UGGA-AACAC-CUGGAA--CCAUCCCGAACCCAGCAGUUAAG-CACAGU-GGAG-CU-AAAUGUA-GG-UA----GUAA-------UACUGAGAAUAG-GU-A-A-GCACCA---A-G-C--------
Mycoplasma mobile 1	--------A-C-AAGCAACU-AU-AGC-AA--G-AGUG-UACAC-CUGAAC--CCAUUCCGAACUCAGUAGUUAAG-CCUCUU-AGCG-UC-GAAGAUA-CC-A-----GUAA--------UGGGAAAAUAG-AG-C-G-UUGCUU---U-UU---------
Mycoplasma mycoides 2	--------U-C-UGGUGGUU-AU-AGC-AUA-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCUAU-UACG-GU-GAAAAUA-UU-AC----UUAU-------GUGAGAAGAUAG-CA-A-G-CUGCCA---G-UUU--------
Mycoplasma penetrans 1	------------CAGUGUUA-AU-AUU-GUA-G-UGGA-AACAC-CUGUUC--CCAUCCCGAACACAGAAGUUAAG-CACUAU-GAAG-CC-AAAGGUA-GC-------UUUU---------GCAAGAAUAG-GA-A-G-AUGCUG---C-UU---------
Mycoplasma pulmonis 1	----------C-AAGUGACC-AU-AAC-G---C-AAGU-UAUAC-CUGAUA--CCAUUCCGAACUCAGUAGUCAAG-ACUUGU-GGUG-CC-GACGAUA-CC-C-----GCU---------GGGGAAAAUAG-GG-A-G-UUGCUU---U-UU---------
Mycoplasma hyopneumoniae 1	--------A-A-GAGUAACA-AU-AGC-AAA-A-GGG--AUCAC-CUGAAU--CCAUUCCGAACUCAGUAGUUAAG-CCUUUU-UACG-CC-GAAGAUA-CU-A-----GAAA--------UAGGAAAAUAG-GG-A-G-UUACUC---U-U----------
Mycoplasma gallisepticum 2	--------U-G-UGAUAUCG-AU-AUC-GUG-A-UGGA-AACAC-CUGGUC--CCAUUCCGAACCCAGAAGUUAAG-CAUCAU-GGAG-CC-AAAGGUA-GC-GCAA--GCAA----GA-AUAGGAAAAUAU-CA-C-G-CAAAGA---A-A----------
Mycoplasma gallisepticum 3	--------U-G-UGAUAUCG-AU-AUC-GUG-A-UGGA-AACAC-CUGGUC--CCAUUCCGAACCCAGAAGUUAAG-CAUCAU-GGAG-CC-AAAGGUA-GC-GCAA--GCAA----GA-AUAGGAAAAUAU-CA-C-G-CCAACA---A-A----------
Mycoplasma gallisepticum 4	--------U-G-UGAUAUCG-AU-AUC-GUG-A-UGGA-AACAC-CUGGUC--CCAUUCCGAACCCAGAAGUUAAG-CAUCAU-GGAG-CC-AAAGGUA-GC-GCAA--GCAA----GA-AUAGGAAAAUAU-CA-C-G-CCAACA---A-AA---------
Mycoplasma hyopneumoniae 2	-------UA-A-GAGUAACA-AU-AGC-AAA-A-GGG--AUCAC-CUGAAU--CCAUUCCGAACUCAGUAGUUAAG-CCUUUU-UACG-CC-GAAGAUA-CU-A-----GAAA--------UAGGAAAAUAG-GG-A-G-UUACUC---U-UU---------
Mycoplasma mycoides 1	--------U-C-UGGUGGU--AU-AGC-AUA-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCUAU-UACG-GU-GAAAAUA-UU-AC----UUAU-------GUGAGAAGAUAG-CA-A-G-CUGCCA---G-GU---------
Mycoplasma mycoides 3	----------U-UGGUGGU--AU-AGC-AUA-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCUAU-UACG-GU-GAAAAUA-UU-AC----UUAU-------GUGAGAAGAUAG-CA-A-G-CUGCCA---G-UU---------
Mycoplasma pneumoniae 1	--------U-U-UGGUGCCC-AU-GUC-GCU-G-UGGA-AACAC-CUGGUU--CCAUUUCGAACCCAGCAGUUAAG-CACAGU-GGAG-CC-GAAUGUA-GC-UG----UUU--------CAGUGAGAAUAG-GA-A-A-GCACCA---A-GC---------
Mycoplasma sp. 1	--------U-C-UGGUGGUU-AU-AGC-AUA-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCUAU-UACG-GU-GAAGAUA-UU-AC----UUAU-------GUGAGAAAAUAG-CA-A-G-CUGCCA---G-UU---------
Mycoplasma sp. 2	----------C-UGGUGGUU-AU-AGC-AUA-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCUAU-UACG-GU-GAAGAUA-UU-AC----UUAU-------GUGAGAAAAUAG-CA-A-G-CUGCCA---G-U----------
Oceanobacillus iheyensis 1	--------U-C-UGGUAGCG-AU-AGC-GAA-G-AGGC-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGCUUU---GCCC-CUGCAAGAGUAG-GA-C-G-CCGCCA---G-GC---------
Oceanobacillus iheyensis 2	--------U-C-UGGUAGCG-AU-AGC-GAG-A-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUUUUC-AGCG-CC-AAUGGUA-GU-UGGGGUUUU---ACCC-CUGCAAGAGUAG-GA-C-G-CCGCCA---G-GC---------
Oceanobacillus iheyensis 3	--------U-C-UGGUAGCG-AU-AGC-GAA-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGCUUU---GCCC-CUGCAAGAGUAG-GA-C-G-CCGCCA---G-GC---------
Oceanobacillus iheyensis 4	----------C-UGGUAGCG-AU-AGC-GAA-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGCUUU---GCCC-CUGCAAGAGUAG-GA-C-G-CCGCCA---G-GCA--------
Oenococcus oeni 1	--------U-G-UCGUGUUA-AU-UCC-GAU-G-AGGU-CACAC-CUGUUC--CCAUUCCGAACACAGAAGUUAAG-CUUGUC-AGGG-CC-CAAAGUA-GU-UACAGGAACG--CCUG-UUGCAAGGUUAG-GA-C-G-ACGCGA---U-G----------
Paenibacillus popilliae 1	--------U-U-UGGCGACU-AU-GGC-GGA-G-GGGU-UCCAC-GCGUUC--CCAUCUCGAACACGACCGUUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-UGGACCGCAG--GGUC-CUGGGAGAGCAG-GA-C-G-UUGCCA---A-GC---------
Planococcus citreus 1	--------U-C-CAGUGAUG-AU-GGC-AAA-G-AGGC-CACAC-CCGUUC--CCAUGCCGAACACGGAAGUUAAG-CUCUUU-UGCG-CC-GAUGGUA-GU-UGGGGGUUU---CCCC-CUGUGAGAGUAG-GA-C-G-UCGCUG---G-GC---------
Planococcus kocurii 1	--------U-C-CAGUGAUG-AU-GGC-AAA-G-AGGC-CACAC-CCGUUC--CCAUCCCGAACACGGCAGUUAAG-CUCUUU-UGCG-CC-GAUGGUA-GU-UGGGGGUUU---CCCC-CUGUGAGAGUAG-GA-C-G-UCGCUG---G-GC---------
Spiroplasma melliferum 1	--------U-C-UGGUGCUU-AU-GGC-AUA-G-UGGA-CACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CACUAU-UACG-CC-GACGAUA-GC-C-----GCAA--------GGUGAAAAUAG-GG-C-A-GUGCCA---G-GU---------
Sporolactobacillus inulinus 1	--------C-U-UGGCGGUC-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUCCCGAACACGGUCGUUAAG-CUCUUC-UGUG-CC-GAAGGUA-AU-UGGGGGCUGU--CCCC-CUGUGAGAGUAG-GU-C-A-CUGCCA---G-GC---------
Sporosarcina ureae 1	--------U-U-UAGUAACG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUUC-AGCG-CU-GAUGGUA-GU-UGGGGGUUU---CCCC-CUGUGAGAGUAA-GA-C-G-UUGCUA---G-GC---------
Staphylococcus aureus 1	--------U-C-UGGUGACU-AU-AGC-AAG-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCCUU-AGCG-UC-GAUGGUA-GU-CGAAC-UUAC---GUU-CCGCUAGAGUAG-AA-C-G-UUGCCA---G-GC---------
Staphylococcus epidermidis 3	--------U-C-UGGUGAUA-AU-GGC-AAG-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCCUU-AGCG-CC-GAUGGUA-GU-CGGAC-UUAC---GUU-CCGCUAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Streptococcus salivarius 1	--------U-U-AAGUGACG-AU-AGC-CUA-G-GAGA-UACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CCCUAG-UACG-CC-UGAUGUA-GU-UGGGGGUUGC---CCC-CUGUUAGAUACG-GU-A-G-UCGCUU---A-GC---------
Thermoactinomyces vulgaris 1	--------U-C-UGGUGACC-AU-AGC-GGA-G-GGGA-UCCAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-UGGGG-AUGA---CCC-CUGGGAGAGUAG-GU-C-G-UUGCCA---G-GC---------
Sporolactobacillus nakayamae 1	--------C-U-UGGCGGUC-AU-AGC-GAA-GAGGGU-CACAC-CCGUUC--CCAUCCCGAACACGGUCGUUAAG-CUCUUC-UGUG-CC-GAUGGUA-AU-UGGGGGCUGU--CCCC-CUGUGAGAGUAG-GU-C-A-CUGCCA---G-GC---------
Sporosarcina pasteurii 1	--------U-U-UGGUGGCG-AU-AGC-GAA-G-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-GU-UGGGGUGUUA--GCCC-CUGCAAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Staphylococcus aureus 2	--------U-C-UGGUGGCU-AU-AGC-AAG-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCCUU-AGCG-UC-GAUGGUA-GU-CGAAC-UUAC---GUU-CCGCUAGAGUAG-AA-C-G-UUGCCA---G-GC---------
Staphylococcus aureus 3	--------U-C-UGGUGAAU-AU-AGC-AAG-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCCUU-AGCG-UC-GAUGGUA-GU-CGAAC-UUAC---GUU-CCGCUAGAGUAG-AA-C-G-UUGCCA---G-GC---------
Staphylococcus epidermidis 1	--------U-C-UGGUGACA-AU-GGC-AAG-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCCUU-AGCG-CC-GAUGGUA-GU-CGGAC-UGAC---GUU-CCGCUAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Staphylococcus epidermidis 2	--------U-C-UGGUGACA-AU-GGC-AAG-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCCUU-AGCG-CC-GAUGGUA-GU-CGGAC-UGAC---GUU-ACGCUAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Staphylococcus haemolyticus 1	--------U-C-UGGUGACA-AU-GGC-AAG-G-AGGU-CACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CUCCUU-AGCG-CC-GAUGGUA-GU-UGGAU-UUAC---GUU-CCGCUAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Staphylococcus haemolyticus 2	--------U-C-UGGUGACA-AU-GGC-AAG-G-AGGU-CACAC-CUGUUC--UCAUGCCGAACACAGAAGUUAAG-CUCCUU-AGCG-CC-GAUGGUA-GU-UGGAU-UUAC---GUU-CCGCUAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Streptococcus agalactiae 1	--------U-U-AAGUGAUA-AU-UGC-CUA-G-GAGA-UACAC-CUGUUC--UCAUGCCGAACACAGAAGUUAAG-CCCUAG-AACG-CC-GGAAGUA-GU-UGGGGGUUG---CCCC-CUGUGAGAUAAG-GU-A-G-UCGCUU---A-GC---------
Streptococcus agalactiae 2	--------U-U-AAGUGAUA-AU-UGC-CUA-G-GAGA-UACAC-CUGUUC--UCAUGCCGAACACAGAAGUUAAG-CCCUAG-AACG-CC-GGAAGUA-GU-UGGGGGUUG---CCCC-CUGUGAGAUAAG-GU-A-G-UCGCUU---A-GC---------
Streptococcus mutans 1	--------U-U-AAGUGAUG-AU-AGC-CUA-G-GGGA-GACAC-CUGUAU--CCAUGCCGAACACAGCAGUUAAG-CCCUAG-CACG-CC-UGAAGUA-GU-UGGGGGUUG---CCCC-CUGUGAGAUAGG-GU-C-G-UCGCUU---A-GC---------
Streptococcus mutans 2	--------U-U-AAGUGAUG-AU-AGC-CUA-G-GGGA-GACAC-CUGUAU--CCAUGCCGAACACAGCAGUUAAG-CCCUAG-CACG-CC-UGAAGUA-GU-UGGGGGUUG---CCCC-CUGUGAGAUAGG-GU-C-G-UCGCUU---G-GC---------
Streptococcus mutans 3	--------U-U-AAGUGAUG-AU-AGC-CUA-G-GGGA-GACAC-CUGUAC--CCAUGCCGAACACAGCAGUUAAG-CCCUAG-CACG-CC-UGAAGUA-GU-UGGGGGUUG---CCCC-CUGUGAGAUAGG-GU-C-G-UCGCUU---A-GC---------
Streptococcus pneumoniae 1	----------U-AAGUGACG-AU-AGC-CUA-G-GAGA-UACAC-CUGUAC--CCAUGCCGAACACAGAAGUUAAG-CCCUAG-AACG-CC-GGAAGUA-GU-UGGGGGUUG---CCCC-CUGUGAGAUAGG-GA-A-G-UCGCUU---A-GC---------
Streptococcus pneumoniae 2	--------U-U-AAGUGACG-AU-AGC-CUA-G-GAGA-UACAC-CUGUAC--CCAUGCCGAACACAGAAGUUAAG-CCCUAG-AACG-CC-GGAAGUA-GU-UGGGGGUUG---CCCC-CUGUGAGAUAGG-GA-A-G-UCGCUU---A-GC---------
Streptococcus pyogenes 1	--------U-U-AAGUGACG-AU-AGC-CUA-G-GAGA-UACAC-CUGUAC--CCAUGCCGAACACAGCAGUUAAG-CCCUAG-AAUG-CC-UGAUGUA-GU-UGGGGGUUG---CCCC-CUGUGAGAUAAG-GU-A-G-UCGCUU---A-GC---------
Streptococcus pyogenes 2	--------U-U-AAGUGACG-AU-AGC-CUA-G-GAGA-UACAC-CUGUAC--CCAUGCCGAACACAGCAGUUAAG-CCCUAG-AACG-CC-UGAUGUA-GU-UGGGGGUUG---CUCC-CUGUGAGAUAAG-GU-A-G-UCGCUU---A-GC---------
Streptococcus pyogenes 3	--------U-U-AAGUGACG-AU-AGC-CUA-G-GAGA-UACAC-CUGUAC--CCAUGCCGAACACAGCAGUUAAG-CCCUAG-AACG-CC-UGAUGUA-GU-UGGGGGUUG---CCCC-CUGUGAGAUAAG-GU-A-G-UCGCUU---A-GC---------
Streptococcus pyogenes 4	--------U-U-AAGUGACG-AU-AGC-CUA-G-GAGA-UACAC-CUGUAC--CCAUGCCGAACACAGCAGUUAAG-CCCUAG-AACG-CC-UGAUGUA-GU-UGGGGGUUG---CCCC-CUGUGAGAUAAG-GU-A-G-UCGCUU---A-GC---------
Streptococcus thermophilus 1	--------U-U-AAGUGACG-AU-AGC-CUA-G-GAGA-UACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CCCUAG-UACG-CC-UGAUGUA-GU-UGGGGGUUG---CCCC-CUGUUAGAUACG-GU-A-G-UCGCUU---A-GC---------
Streptococcus thermophilus 2	--------U-U-AAGUGACG-AU-AGC-CUA-G-GAGA-UACAC-CUGUUC--CCAUGCCGAACACAGAAGUUAAG-CCCUAG-UACG-CC-UGAUGUA-GU-UGGGGGUUG---CCCC-CUGUUAGAUACG-GU-A-G-UCGCUU---A-GC---------
Ureaplasma parvum 1	------------UAGUGAUU-AU-AUC-AGA-G-UGGA-AAUAC-CUGUUC--CCAUCCCGAACACAGAAGUCAAG-CACUCU-AGAG-CC-GAAAAUA-GC-------GCAA---------GU-AAAAUAG-GU-C-A-UCGCUA---C-GC---------
Ureaplasma parvum 2	------------UAGUGAUU-AU-AUC-AGA-G-UGGA-AAUAC-CUGUUC--CCAUCCCGAACACAGAAGUCAAG-CACUCU-AGAG-CC-GAAAAUA-GC-------GCAA---------GU-AAAAUAG-GU-C-A-UCGCUA---C-GC---------
Ureaplasma parvum 3	--------U-G-UAGUGAUU-AU-AUC-AGA-G-UGGA-AAUAC-CUGUUC--CCAUCCCGAACACAGAAGUCAAG-CACUCU-AGAG-CC-GAAAAUA-GC-------GCAA---------GU-AAAAUAG-GU-C-A-UCGCUA---C-GC---------
Ureaplasma urealyticum 2	--------U-G-UAGUGAUC-AU-AUC-AGA-G-UGGA-AAUAC-CUGUUC--CCAUCCCGAACACAGAAGUCAAG-CACUCU-AGAG-CC-GAAAAUA-GC-------GCAA---------GU-AAAAUAG-GU-C-A-UCGCUA---C-GC---------
Ureaplasma urealyticum 3	--------U-G-UAGUGAUC-AU-AUC-AGA-G-UGGA-AAUAC-CUGUUC--CCAUCCCGAACACAGAAGUCAAG-CACUCU-AGAG-CC-AAAAAUA-GC-------GUAA---------GU-AAAAUAG-GU-C-A-UCGCUA---C-GC---------
Ureaplasma urealyticum 1	--------U-G-UAGUGAUC-AU-AUC-AGA-G-UGGA-AAUAC-CUGUUC--CCAUCCCGAACACAGAAGUCAAG-CACUCU-AGAG-CC-GAAAAUA-GC-------GCAA---------GU-AAAAUAG-GU-C-A-UCGCUA---C-GC---------
Weissella viridescens 1	--------U-G-UUGUGAUG-AU-GGC-AUU-G-AGGC-CACAC-CUGUUC--CCAUACCGAACACAGAAGUUAAG-CUCAAU-AGCA-CC-GAAAGUA-GU-UGGAGGAUCU--CUUC-CUGCGAGGAUAG-GA-C-G-UCGCGA---U-GC---------
Weissella viridescens 2	--------U-G-UUGUGAUG-AU-GGC-AUU-G-AGGU-CACAC-CUGUUC--CCAUACCGAACACAGAAGUUAAG-CUCAAU-AGCG-CC-GAAAGUA-GU-UGGAGGAUCU--CUUC-CUGCGAGGAUAG-GA-C-G-UCGCAA---U-GC---------
Fusobacterium mortiferum 1	--------C-U-UGGUGAGA-AG-AGC-UAC-G-GGGG-UACAC-CCAGAA--ACAUUCCGAACCUGGAAGUUAAG-CCCGUA-AACG-CU-GAAAGUA-CU-UGGAGGGAAG--CCUC-CUGGGAGGAUAG-GA-A-C-UUGCCA---A-GU---------
Fusobacterium mortiferum 2	--------C-U-UGGUAAGA-AU-AGC-UGC-G-GGGG-UACAC-CUGGUC--CCAUUCCGAACCCAGAAGUUAAG-CCCGUA-AACG-CU-GAAAGUA-CU-UGGAGGGAAG--CCUC-CUGGGAGGAUAG-GA-A-C-UUGCCA---A-GU---------
Fusobacterium nucleatum 3	--------C-U-UGGUGAGU-AU-AGC-UAU-G-GGGG-UACAC-CUAGUU--ACAUUCCGAACCUAGAAGUUAAG-CCCAUA-UACG-CU-GAUGGUA-CU-UGGCUGGAAG--CGGC-CUGGGAGAGUAU-GG-A-U-UUGCCA---A-GC---------
Fusobacterium nucleatum 1	--------C-U-UGGUGAGU-AU-AGC-UAU-G-GGGG-UACAC-CUAGUU--ACAUUCCGAACCUAGAAGUUAAG-CCCAUA-UACG-CU-GAUGGUA-CU-UGGCUGGAAG--CGGC-CUGGGAGAGUAU-GG-A-U-UUGCCA---A-G----------
Fusobacterium nucleatum 2	--------C-U-UGGUGAGU-AU-AGC-UAU-G-GGGG-UACAC-CUAGUU--ACAUUCCGAACCUAGAAGUUAAG-CCCAUA-UACG-CU-GAUGGUA-CU-UGGCUGGAAG--UGGC-CUGGGAGAGUAU-GG-A-U-UUGCCA---A-G----------
Fusobacterium nucleatum 4	----------U-UGGUGAGU-AU-AGC-UAU-G-GGGG-UACAC-CUAGUU--ACAUUCCGAACCUAGAAGUUAAG-CCCAUA-UACG-CU-GAUGGUA-CU-UGGCUGGAAG--CGGC-CUGGGAGAGUAU-GG-A-U-UUGCCA---A-GC---------
Fusobacterium nucleatum 5	----------U-UGGUGAGU-AU-AGC-UAU-G-GGGG-UACAC-CUAGUU--ACAUUCCGAACCUAGAAGUUAAG-CCCAUA-UACG-CU-GAUGGUA-CU-UGGCUGGAAG--CGGC-CAGGGAGAGUAU-GG-A-U-UUGCCA---A-GC---------
Fusobacterium varium 1	--------C-U-UGGUAAGA-AU-AGC-UGC-G-GGGG-UACAC-CUGGUC--CCAUUCCGAACCCAGAAGUUAAG-CCCGUA-AACG-CU-GAAAGUA-CU-UGGAGGGAAG--CCUC-CUGGGAGGAUAG-GA-A-C-UUGCCA---A-GC---------
Rhodopirellula baltica 1	-------UU-C-CGGCGAUC-AU-AUC-UUA-A-AGGU-UAUAC-CUGUUC--CCAUUCCGAACACAGCAGUCAAG-CUUUAA--GAG-CC-GAUGAUA-GU-GC----CCACCA-----GCGUGAAAGUAG-GU---C-UUGCCG---G-AU---------
Gemm_obscu::B	-------UU-C-CGGUGACC-AU-ACC-CAA-A-CGGA-AACAC-CCGUUC--CCAUUCCGAACACGGCCGUGAAA-CGUUUG-AGG--CC-GAUGGUA-GU-GC----GUCCA------GCGCGAGAGUAG-GU---A-UCGCCG---G-CC---------
Planctomyces brasiliensis 1	-------UU-C-UGGUGACU-UU-ACG-UCU-G-GGGA-AACAC-UCGUUC--CCAUUCCGAACACGACAGUUAAG-CCCUGA--CGG-CC-GAUGAUA-GU-AC----UGCAA------GUGUGAAAGUAG-GU-G-A-UUGCCA---G-AC---------
Planctomyces limnophilus 1	-------UU-C-CGGUGACU-UU-ACG-CGU-G-AGGA-AACAC-UCGUUC--CCAUUCCGAACACGACAGUUAAG-CUCCCG--CGG-CC-GAUGAUA-GU-GC----CCACCA-----GCGUGAAAGUAG-GU-U-A-UCGCCG---G-AC---------
Pirellula sp. 1	-------UU-C-CGGUGACC-AU-AUG-GUU-G-UGGA-AACAC-CUGUUC--CCUUUCCGAACACAGCAGUUAAG-CACAAC--CAG-CC-GAUGAUA-GU-GC----CCACCA-----GUGCGAAAGUAG-GU---A-UCGCCG---G-AUC--------
Pirellula sp. 2	-------UU-C-CGGCGAUC-AU-AUC-UUA-A-AGGU-UAUAC-CUGUUC--CCAUUCCGAACACAGCAGUCAAG-CUUUAA--GAG-CC-GAUGAUA-GU-GC----CCACCA-----GCGUGAAAGUAG-GU---C-UUGCCG---G-AUC--------
Blastopirellula marina 1	-------UU-C-CGGUGACC-AU-AUC-GAA-A-AGGU-CAUAC-CUGUUC--CCAUUCCGAACACAGCCGUCAAG-CUUUUC--GAG-CC-GAUGAUA-GU-AC----CACAA------GUGUGAAAGUAG-GU---A-UCGCCG---G-AUC--------
Isosphaera pallida 1	-------CU-C-CGGUGACC-AU-ACC-GUC-G-GGGU-CCUAC-CCGUUC--CCAUUCCGAACACGGCCGUCAAG-CCCGCC--GGG-CC-UAUGAUA-GU-GC----GUCA-------GCGCGAAAGUCG-GU-G-A-UCGCCG---G-AUCU-------
Acetobacter aceti 1	-----RGAC-C-UGGUGGCU-AU-GGC-GGG-A-GAGA-UCCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-ACCCCC-AGCG-CC-UAUGAUA-CU-GCGGC-UUAA---GCC-GUGGGAAAGUCG-GU-C-G-CCGCCA---G-GUCU-------
Acetobacter aceti 2	-----GGAC-C-UGGUGGCU-AU-GGC-GGG-A-GAGA-UCCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-ACCCCC-AGCG-CC-UAUGAUA-CU-GCGGC-UUAA---GCC-GUGGGAAAGUCG-GU-C-G-CCGCCA---G-GUCC-------
Acetobacter pasteurianus 1	-----RRAC-C-UGGUGGCC-AU-GGC-GGG-A-GAGA-UCCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-ACCCCC-AGCG-CC-UAUGAUA-CG-UUGGC-UUAA---GCC-ACGGGAAAGUCG-GU-C-G-CCGCCA---G-GUCU-------
Acetobacter sp. 2	-----NGAU-C-UGAUGACC-AU-GGC-GGGAG-CA-A-AUCAC-CCGAUC--CCAUCCCGAACUCGGCCGUCAAA-UGCCCC-AGCG-CC-CAUGAUA-CU-CUGCC-UCAA---GGC-ACGGAAAAGUCG-GU-C-G-CCGCCA---G-AUCY-------
Acetobacter sp. 3	-----NGAU-C-UGGUGGUC-AU-AGC-GGGAG-UA-A-AUCAC-CCGAUC--CCAUCCCGAACUCGGCCGUCAAA-UGCCUC-AGCG-CC-CAUGAUA-CU-CUGCC-UCAA---GGC-ACGGAAAAGUCG-GU-C-G-CCGCCA---G-ACCC-------
Acetobacter sp. 4	-----NGAU-C-UGGUGGCC-AU-GGC-GGCAG-CA-A-AUCAC-CCGAUC--CCAUGCCGAACUCGGCCGUCAAA-UGCCCC-AGCG-CC-CAUGAUA-CU-CUGCC-UCAA---GGC-ACGGAAAAGUCG-GU-C-G-CCGCCA---G-AUCY-------
Acetobacter sp. 5	------NNU-C-UGAUGGCC-AU-GGC-GGGAG-CA-A-AUCAC-CCGAUC--CCAUCCCGAACUCGGCCGUCAAA-UGCCCC-AGCG-CC-CAUGAUA-CU-CUGCC-UCAA---GGC-ACGGAAAAGUCG-GU-C-G-CCGCCA---G-AUC--------
Acetobacter sp. 6	------GAU-C-UGGUGGCC-AU-GGC-GGGAG-CA-A-AUCAG-CCGAUC--CCAUCCCGAACUCGGCCGUCAAA-UGCCCC-AGCG-CC-CAUGAUA-CU-CUGCC-UCAA---GGC-ACGGAAAAGUCG-GU-C-G-CCGCCA---G-AYY--------
Acetobacter sp. 7	-----NGAU-C-UGAUGGCC-AU-GGC-GGGAG-CA-A-AUCAC-CCGAUC--CCAUCCCGAACUCGGCCGUCAAA-UGCCCC-AGCG-CC-CAUGAUA-CU-CUGCC-UCAA---GGC-ACGGAAAAGUCG-GU-C-G-CCGCCA---G-AUCY-------
Acidomonas methanolica 1	-----NGAU-C-UGGUGGCC-AU-GGC-GGGAG-CA-A-AUCAG-CCGAUC--CCAUCCCGAACUCGGCCGUCAAA-UGCCCC-AGCG-CC-CAUGAUA-CU-CUGCC-UCAA---GGC-ACGGAAAAGUCG-GU-C-G-CCGCCA---G-AUCY-------
Acidiphilium acidophilum 1	-----CGAC-C-UGGUGGCC-AU-UGC-GGG-G-GGCC-CGCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-ACCCCC-AGCG-CC-CAUGGUA-CU-GUGCC-UCAA---GGC-ACGGGAGAGUAG-GU-C-G-CCGCCA---G-GUCC-------
Acidiphilium cryptum 1	-----CGAC-C-UGGUGGCC-AU-UGC-GGG-G-AGCC-UGCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-AUCCCC-AGCG-CC-CAUGGUA-CU-GUGCC-UCAA---GGC-ACGGGAGAGUAG-GU-C-G-CCGCCA---G-GUCCUC-----
Agrobacterium tumefaciens 6	-----CGAC-C-UGGUGGUC-AU-CGC-GGG-G-CGGC-UGCAC-CCGUUC--CCUUUCCGAACACGGCCGUGAAA-CGCCCC-AGCG-CC-AAUGGUA-CU-UCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCU-------
Agrobacterium vitis 1	------GAC-C-UGGUGGUC-AU-GGC-GGG-G-CGGC-CGCAC-CCGUUC--CCAUUCCGAACACGGCCGUGAAA-CGCCCC-UGCG-CC-AAUGGUA-CU-UCGUC-UUAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCU-------
Ancylobacter aquaticus 1	--------C-C-UGGUGGCC-AU-UGC-GAG-G-AGCC-CCAAC-CCGAUC--CCAUCCCGAACUCGGCCGUUAAA-CUCCUC-AGCG-CC-GAUGGUA-CU-AUGUC-UCAA---GAC-CUGGGAGAGUAG-GU-C-G-CUGCCA---G-GCCU-------
Azospirillum lipoferum 1	-------CU-AGUGAUGAGU-AU-GGC-AAA-G-AGGU-CA-AC-CCGUU---CCAUACCGAACACGGAAGUUAAG-CUCUUU-AGCG-CC-GAUGGUA-GU-UGGGGGCUU---CCCC-CUGUGAGAGUAG-GA-C-G-UCGCUA---G-G----------
Bartonella bacilliformis 1	------GAC-U-UGGUGGUU-AU-GGC-GGA-A-CGCC-UGCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-CGUUCC-AGCG-CU-GAUGGUA-CU-UUGUC-UUAA---GGC-ACGGGAGAGUAA-GU-C-G-CUGCCA---G-GUCU-------
Bartonella henselae 2	------GAC-U-UGGUGGUU-AU-GGC-GGA-G-UGAA-CGCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-CGCUCC-AGCG-CU-GAUGGUA-CU-UUGCC-UCAA---GGC-ACGGCAGAGUAA-GU-C-G-UUGCCA---G-GUCU-------
Bartonella quintana 2	------GAC-U-UGGUGGUU-AU-GGC-GGA-G-CGAA-CGCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-CGUUCC-AGCG-CU-GAUGGUA-CU-UUGCC-UCAA---GGC-ACGGCAGAGUAA-GU-C-G-UUGCCA---G-GUCU-------
Bradyrhizobium japonicum 1	------GGC-C-UGGUGGUU-UU-AGC-GAA-G-AGCC-UCAAC-CCGAUC--CCAUCCCGAACUCGGCCGUUAAA-CUCUUC-AGCG-CC-AAUGGUA-CU-AUGGC-UUAA---GCC-CUGGGAGAGUAG-GU-C-G-CUGCCA---G-GCCU-------
Brucella melitensis 2	------GAC-C-UGGUGGUU-AU-GGC-GGA-G-CGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CGCUCC-AGCG-CC-AAUGGUA-CU-UCGUC-UCAA---GAG-GAGGCAGAGUAG-GU-C-G-AUGCCA---G-GUCU-------
Caulobacter crescentus 1	-----CGAC-C-UGGUGGCU-AU-GCC-GGG-G-GUUA-CCCAC-CCGAUC--CCAUUCCGAACUCGGUCGUUAAG-UCCCCC-UGGG-CC-AAUGGUA-CU-UCGUC-UCAA---GGC-GCGGGAGAGUAG-GU-C-G-CCGCCA---G-GCC--------
Caulobacter sp. 1	------GAC-C-UGGUGGCU-AU-GUC-GGU-G-GUUC-CCCAC-CCGAUC--CCAUUCCGAACUCGGUCGUUAAG-CCCUCC-AGAG-CC-GAUGGUA-CU-UCGUC-UUAA---GGC-GCGGGAGAGUAG-GU-C-G-CCGCCG---G-GUCU-------
Caulobacter sp. 2	------GAC-C-CGGCGGCU-AU-GUC-GGA-G-GUUC-CCCAC-CCGAUC--CCAUUCCGAACUCGGUCGUUAAG-CCCUCC-AGAG-CC-AAUGGUA-CU-UCGUC-UCAA---GGC-GCGGGAGAGUAG-GU-C-G-CCGCCG---G-GCCU-------
Caulobacter sp. 3	------GAC-C-UGGUGGCU-AU-GUC-GGA-G-GUUC-CCCAC-CCGAUC--CCAUUCCGAACUCGGUCGUUAAG-CCCUCC-AGAG-CC-GAUGGUA-CU-UCGUC-UUAA---GGC-GCGGGAGAGUAG-GU-C-G-CCGCCG---G-GUCU-------
Caulobacter sp. 5	------GAC-C-CGGUGGCU-AU-GUC-GGA-G-GUUC-CCUAC-CCGAUC--CCAUUCCGAACUCGGUCGUUAAA-GCCUCC-AGAG-CC-GAUGGUA-CU-UCGUC-UUAA---GUC-GCGGGAGAGUAG-GU-C-G-CCGCCG---G-GUCU-------
Caulobacter sp. 6	------GAC-C-UGGCGGCU-AU-GCC-GGG-G-GUUC-CCCAC-CCGAUC--CCAUUCCGAACUCGGUCGUUAAG-CCCUCC-UGGG-CC-AAUGGUA-CU-UCGUC-UUAA---GGC-GCGGGAGAGUAG-GU-C-G-CCGCCA---G-GCCC-------
Caulobacter sp. 7	------GAC-C-CGGCGGCU-AU-GUC-GGA-G-GUUC-CCCAC-CCGAUC--CCAUUCCGAACUCGGUCGUUAAG-CCCUCC-AGAG-CC-GAUGGUA-CU-UCGUC-UUAA---GGC-GCGGGAGAGUAG-GU-C-G-CCGCCG---G-GCCC-------
Acetobacter sp. 1	------GAU-C-UGGUGGCC-AU-GGC-GGG-G-CGCA-AUCAC-CCGAUC--CCAUCCCGAACUCGGCCGUCAAA-UGCCCC-AGCG-CC-CAUGAUA-CU-CUGCC-UCAA---GGC-ACGGAAAAGUCG-GU-C-G-CCGCCA---G-AUCC-------
Agrobacterium tumefaciens 1	------GAC-C-UGGUGGUU-AU-CGC-GGG-G-CGGC-UGCAC-CCGUUC--CCAUUCCGAACACGGCCGUGAAA-CGCCCC-AGCG-CC-AAUGGUA-CU-CCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCUGCAAAAC
Agrobacterium tumefaciens 2	------GAC-C-UGGUGGUU-AU-CGC-GGG-G-CGGC-UGCAC-CCGUUC--CCAUUCCGAACACGGCCGUGAAA-CGCCCC-AGCG-CC-AAUGGUA-CU-CCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUC--------
Agrobacterium tumefaciens 3	------GAC-C-UGGUGGUU-AU-CGC-GGG-G-CGGC-UGCAC-CCGUUC--CCAUUCCGAACACGGCCGUGAAA-CGCCCC-AGCG-CC-AAUGGUA-CU-UCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUC--------
Agrobacterium tumefaciens 4	------GAC-C-UGGUGGUU-AU-CGC-GGG-G-CGGC-UGCAC-CCGUUC--CCAUUCCGAACACGGCCGUGAAA-CGCCCC-AGCG-CC-AAUGGUA-CU-CCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCUGCA----
Agrobacterium tumefaciens 7	------GAC-C-UGGUGGUU-AU-CGC-GGG-G-CGGC-UGCAC-CCGUUC--CCUUUCCGAACACGGCCGUGAAA-CGCCCC-AGCG-CC-AAUGGUA-CU-UCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCUGCAAAAC
Agrobacterium tumefaciens 8	------GAC-C-UGGUGGUU-AU-CGC-GGG-G-CGGC-UGCAC-CCGUUC--CCUUUCCGAACACGGCCG-GAAA-CGCCCC-AGCG-CC-AAUGGUA-CU-UCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCUGCAAAAC
Anaplasma marginale 1	------UGG-C-UGGUGGUU-AU-GGC-GGG-A-GUGA-AACAC-CCGGUA--ACAUCCCGAACCCGGAAGUUAAG-CCUCCC-AGCG-CC-UGUGGUA-CU-UUGUC-UUAA---GAC-ACGGGAGAGAGG-GU-C-G-CUGCCA---G-CCUU-------
Anaplasma phagocytophilum 1	------GG--C-UGGUGGUA-AU-GGC-AGG-A-GUGA-AACAC-CCGGUA--ACAUUCCGAACCCGGAAGUUAAG-CCUCCU-AGCG-CC-UGUGGUA-CU-UUGUC-UUAA---GAC-AUGGGAGAGAGG-GU-C-G-CUGCCA---G-CCAA-------
Brucella abortus 1	------GAC-C-UGGUGGUU-AU-GGC-GGA-G-CGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CGCUCC-AGCG-CC-AAUGGUA-CU-UCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCU-------
Bartonella henselae 1	------GAC-U-UGGUGGUU-AU-GGC-GGA-G-UGAA-CGCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-CGCUCC-AGCG-CU-GAUGGUA-CU-UUGCC-UUAA---GGC-ACGGGAGAGUAA-GU-C-G-CUGCCA---G-GUCU-------
Bartonella quintana 1	------GAC-U-UGGUGGUU-AU-GGC-GGA-G-CGAA-CGCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-CGUUCC-AGCG-CU-GAUGGUA-CU-UUGCC-UUAA---GGC-ACGGGAGAGUAA-GU-C-G-CUGCCA---G-GUCU-------
Brucella melitensis 1	------GAC-C-UGGUGGUU-AU-GGC-GGA-G-CGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CGCUCC-AGCG-CC-AAUGGUA-CU-UCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUC--------
Brucella melitensis 3	------GAC-C-UGGUGGUU-AU-GGC-GGA-G-CGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CGCUCC-AGCG-CC-AAUGGUA-CU-UCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCU-------
Brucella suis 1	------GAC-C-UGGUGGUU-AU-GGC-GGA-G-CGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CGCUCC-AGCG-CC-AAUGGUA-CU-UCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCUGCAAAG-
Brucella suis 2	------GAC-C-UGGUGGUU-AU-GGC-GGA-G-CGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CGCUCC-AGCG-CC-AAUGGUA-CU-UCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCU-------
Candidatus Pelagibacter ubique 1	------UCG-C-CGGUGAUU-AU-UGC-GAA-G-GGGU-UAUAC-CCGAUC--CCAUUCCGAACUCGGAAGUCAAG-CCCUUC-AGCG-CC-AAUGGUA-CU-UUGUC-UUAA---GAC-ACGGAAGAGUAG-GA-C-A-UUGCCG---G-CUAU-------
Caulobacter crescentus 2	------GAC-C-UGGUGGCU-AU-GCC-GGG-G-GUUC-CCCAC-CCGAUC--CCAUUCCGAACUCGGUCGUUAAG-UCCCCC-UGGG-CC-AAUGGUA-CU-UCGUC-UCAA---GGC-GCGGGAGAGUAG-GU-C-G-CCGCCA---G-G----------
Caulobacter spinosum 1	-----CGAC-C-UGGUGGCU-AU-GCC-GGG-G-GUUA-CCCAC-CCGAUC--CCAUUCCGAACUCGGUCGUUAAG-UCCCCC-UGGG-CC-AAUGGUA-CU-UCGUC-UCAA---GGC-GCGGGAGAGUAG-GU-C-G-CCGCCA---G-G----------
Caulobacter sp. 4	------GAC-C-CGGCGGCU-UU-GCC-GGG-G-GUUC-CCCAC-CCGAUC--CCAUUCCGAACUCGGUCGUUAAG-UCCCCC-UGGG-CC-AAUGGUA-CU-UCGUC-UCAA---GGC-GCGGGAGAGUAG-GU-C-G-CCGCCA---G-GUCU-------
Ehrlichia chaffeensis 1	------GGG-U-UGGUGGUA-AU-AGC-GGA-A-GUGG-UACAC-CCAGCUU-ACAUUUCGAACCUGGAAGUUAAG-CCUUCU-AGCG-CU-GAUGGUA-CU-UUGUC-UUAA---GAC-AUGGGAGAGUAA-GU-C-A-CUGCCA---C-CCUU-------
Ehrlichia ruminantium 1	------GGG-U-UGGUGGUA-AU-AGC-AGA-A-GUGA-UACAC-CCAGCU--ACAUUUCGAACCUGGAAGUUAAG-CCUUCU-AGCG-CU-UAUGGUA-CU-UUGUC-UUAA---GGC-ACGGGAGAGUAG-GU-C-G-CUGCCA---C-CCUU-------
Erythrobacter longus 1	-----UUGC-U-UGGUGGUC-CU-AGC-GAC-U-GUGA-CCCAC-CCGAUC--CCAUCUCGAACUCGGCCGUGAAA-CCAGUU-AGCG-CC-GAUGGUA-CU-AUGUC-UUAA---GGC-AUGGAAGAGUAG-GU---G-CCGCCA---G-GCAU-------
Erythromicrobium ezovicum 1	------UGC-U-UGGCUGGU-AUAGGC-GUC-U-GAAC-CGAAC-CCGAUC--CCAUCUCGAACUCGGCCGGUAAA-UCAGAC-AGCG-CC-GAUGGUA-CU-AACGC-UGAA---GCG-UUGGAAGAGUAG-GU-C-GUUGUCCA---A-GCU--------
Erythromicrobium hydrolyticum 1	-----UGCC-U-UGGUGCAC-AG-UGC-UUG-U-GGUA-CCCAC-GCGAUC--CCAUCUCGGACUCGGCCGUGAAA-CCAGAC-AGCG-CC-GAUGGUA-UC-AACGC-UCAA---GCG-UUGGAAGAGUAG-GU-C-G-CCGCCA---U-GGAU-------
Erythromicrobium ramosum 1	-----UGCC-U-UGGCCUCG-AU-AGU-GCG-U-CGUA-CCCAC-GCGAUC--CCAUCUCGGACUCGGCCGUGAAA-CCAGAC-UGCG-CC-GAUGGUA-CU-AACUG-CUAA---GCG-UUGGAAGAGUAG-GU-C-G-CUGCCA---A-GGGU-------
Gluconacetobacter xylinus 1	-----AGAC-C-UGGUGGCA-AU-GGC-GGG-G-AAUA-UCCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-UGCCCC-AGCG-CC-CAUGAUA-CU-GUGCC-UUAA---GGC-ACGGGAAAGUCG-GU-C-G-CCGCCA---G-GUCU-------
Gluconobacter oxydans 3	----GG-AC-C-UGGUGGCC-AU-UGC-GAG-G-GCCC-UACAC-CCGAUC--CCUUCCCGAACUCGGCCGUGAAA-UCCCUC-AGCG-CC-UAUGAUA-CU-GCACC-UCAA---GGU-GCGGAAAAGUCG-GU-C-G-CCGCCA---G-GU-CC------
Gluconobacter oxydans 4	----RG-AC-C-UGGUGGCC-AU-UGC-GAG-G-GCCC-UACAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-UCCCUC-AGCG-CC-UAUGAUA-CC-GUACC-UUAA---GGU-GCGGAAAAGUCG-GU-C-G-CCGCCA---G-GU-CC------
Hyphomicrobium sp. 1	------GAC-C-UGGUGAUU-AU-GAC-GGA-G-UGGC-UGCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-CGCUCC-AGCG-CC-AAUGGUA-CU-GCGUC-UUAA---GAC-GUGGGAGAGUAG-GU-C-G-UCGCCA---G-GUCU-------
Hyphomicrobium sp. 2	------GAC-C-UGGUGAUU-AU-GGC-GGG-G-UGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CGCCCC-UGCG-CC-GAUGGUA-CU-UCGUC-UUAA---GAC-GCGGGAGAGUAG-GU-C-G-UUGCCA---G-GUCU-------
Hyphomicrobium sp. 2	------GAC-C-UGGUGAUU-AU-GGC-GGG-G-UGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CGCCCC-UGCG-CC-GAUGGUA-CU-UCGUC-UUAA---GAC-GCGGGAGAGUAG-GU-C-G-UUGCCA---G-GUCU-------
Hyphomicrobium sp. 3	------GAC-C-UGGUGAUU-AU-GGC-GGG-U-GGCC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CCGCCC-UGCG-CC-GAUGGUA-CU-UCGUC-UUAA---GAC-GCGGGAGAGUAG-GU-C-G-UUGCCA---G-GUCC-------
Hyphomicrobium sp. 4	-----CGAC-C-UGGUGAUU-AU-GGC-GGG-G-UGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CGCCCC-UGCG-CC-GAUGGUA-CU-UCGUC-UUAA---GAC-GCGGGAGAGUAG-GU-C-G-UUGCCA---G-GU---------
Hyphomicrobium sp. 5	-----UGAC-C-UGGUGAUU-AU-GGC-GGG-G-UGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CGCCCC-AGCG-CC-AAUGGUA-CU-UCGUC-UUAA---GAC-GCGGGAGAGUAG-GU-C-G-UCGCCA---G-GUCU-------
Hyphomicrobium sp. 6	------GAC-C-UGGUGAUU-AU-GGC-GGG-G-CGGC-UGCAC-CCGACC--CCAUUCCGAACUCGGCCGUGAAA-CGCCCC-UGCG-CC-GAUGGUA-CU-UCGUC-UUAA---GAC-GCGGGAGAGUAG-GU-C-G-UUGCCA---G-GUCU-------
Hyphomicrobium sp. 7	------GAC-C-UGGUGAUU-AU-GGC-GGG-U-GGUC-UGCAC-CCGAUC--UCAUUCCGAACUCGGCCGUGAAA-CCGCCC-AGCG-CC-AAUGGUA-CU-UCGUC-UUAA---GAC-GCGGGAGAGUAG-GU-C-G-UCGCCA---G-GUCU-------
Hyphomicrobium vulgare 1	-----CGAC-C-UGGUGAUU-AU-GGC-GGG-G-UGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCCUGAAA-CGCCCC-AGCG-CC-AAUGGUA-CU-CUGUC-UUAA---GAC-GCGGGAGAGUAG-GC-C-G-CCGCCA---G-GU---------
Hyphomicrobium vulgare 2	------GAC-C-UGGUGAUU-AU-GGC-GGG-U-GGUC-UGCAC-CCGAUC--UCAUUCCGAACUCGGCCGUGAAA-CCGCCC-AGCG-CC-AAUGGUA-CU-UCGUC-UUAA---GAC-GCGGGAGAGUAG-GU-C-G-UCGCCA---G-GUCU-------
Hyphomonas oligotropha 1	------GAC-C-CGGUGGUU-AU-GGC-CAG-G-GAUC-CCCAC-CUGAUC--CCAUCCCGAACUCAGUCGUUAAG-UCCCCU-UGCG-CC-AAUGGUA-CU-ACGUC-UUAA---GGC-GUGGGAGAGUAG-GU-C-G-CUGCCG---G-GUCC-------
Hyphomonas polymorpha 1	-----CGAC-C-UGGUGGUA-AU-GGU-AGG-G-GGUC-UGGAC-CGGAUC--CCAUCCCGAACUCCGUCGUUAAG-CCCCCU-UGCG-CC-AAUGGUA-CC-ACGUC-UUAA---GGU-GUGGGAGAGUAG-GU-C-G-CUGCCG---G-GUC--------
Mesorhizobium loti 1	------GAC-C-UGGUGGUU-AU-GGC-GGA-G-CGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CGCUCC-AGCG-CU-GAUGGUA-CU-UCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCU-------
Methylobacterium extorquens 1	-------GC-C-UGGCGGCC-UG-AGC-GGU-G-UGGA-AGAAC-CCGAUC--CCAUCUCGAACUCGGCCGUUAAA-CACACC-AGCG-CC-GAUGGUA-CU-GUGUC-UCAA---GAC-ACGGGAGAGUCG-GU-C-G-CCGCCA---G-GCCC-------
Methylobacterium organophilum 1	--------C-C--GGCGGCC-UG-AGC-GGU-G-UGCC-AGAAC-CCGAUC--CCAUCUCGAACUCGGCCGUUAAA-CACACC-AGCG-CC-CAUGGUA-CU-GUGCU-CCAA---GAC-ACGGGAGAGUCG-GU-C-G-CCGCCA---G-GCU--------
Methylobacterium sp. 1	----------C-UGGUGGCC-UG-AGC-GGU-G-UGCCCAGAAC-CCGAUC--CCAUCUCGAACUCGGCCGUUAAA-CACACC-AGCG-CC-CAUGGUA-CU-GUGUC-UCAA---GAC-ACGGGAGAGUCG-GU---G-CCGCCA---G-GCCU-------
Methylocystis parvus 1	------NNC-U-UGGUGACC-AU-AGC-GAG-C-GUGA-ACCAC-CCGAUC--CCAUCCCGAACUCGGAAGUGAAA-CCGCUU-AGCG-CC-GAUGAUA-GU-GUGGC-CGUUU--GCC-AUGCGAAAGUAG-GG-C-A-UUGCMA---A-GCN--------
Methylosinus sporium 1	------NGC-C-UGGUGGCU-UU-AGC-GAA-G-CGAU-CAGAC-CCGAUC--CCAUCCCGAACUCGGCCGUCAAA-CGCUCC-AGCG-CC-AAUGGUA-CU-AUGUC-UCAA---GAC-CUGGGAGAGUAG-GU-C-G-UCGCCA---G-GCUN-------
Methylosinus trichosporium 2	------NNC-U-UGGUGACU-AU-AGU-GAG-C-GUGA-ACCAC-CCGAUC--CCAUCCCGAACUCGGAAGUGAAA-CCGCUU-AGCG-CC-GAUGAUA-GU-GUGGC-CGUUU--GCC-AUGCGAAAGUAG-GG-C-A-UUGCMA---A-GYN--------
Methylosinus trichosporium 1	------GGC-A-UGGUGCCU-UU-AGC-GAA-G-UGAU-UAGACACGUAUC--CCAUCCUGAACUCGGCCGUCAAA-CGCUCC-AGCG-CC-AAUGGUA-CU-AUGUC-UCAA---GAC-CUGGGAGAGUAG-GU-C-G-UCGCCA---G-GCNN-------
Nitrobacter winogradskyi 1	-----CGAC-C-UGGUGGUU-CU-AGC-GAG-G-AGCU-UGAAC-CCGAUC--CCAUCCCGAACUCGGCCGUUAAA-CUCCUC-AGCG-CC-AAUGGUA-CC-AUGGC-UUAA---GCC-CUGGGAGAGUAG-GU-C-G-CUGCCA---G-G----------
Paracoccus sp. 1	------GGU-C-UGGUGGCU-UU-AGC-ACGAG-CA-A-AACAC-CCGAUC--CCAUCCCGAACUCGGCCGUUAAG-UGCCGU-CGCG-CC-AAUGGUA-CU-GCGUC-UCAA---GAC-GUGGGAGAGUAG-GU-C-A-CCGCCA---G-ACC--------
Paracoccus denitrificans 1	-------GU-C-UGGUGGCC-AA-AGC-ACGAG-CA-A-AACAC-CCGAUC--CCAUCCCGAACUCGGCCGUUAAG-UGCCGU-CGCG-CC-AAUGGUA-CU-GCGUC-AAAA---GAC-GUGGGAGAGUGG-AU-C-A-CCGCCA---G-ACC--------
Paracoccus denitrificans 2	-------GU-C-UGGUGGCC-AA-AGC-ACGAG-CA-A-AACAC-CCGAUC--CCAUCCCGAACUCGGCCGUUAAG-UGCCGU-AGCG-CC-AAUGGUA-CU-GCGUC-AAAA---GAC-GUGGGAGAGUAG-GU-C-A-CCGCCA---G-ACC--------
Paracoccus versutus 1	--------U-C-UGGUGGCU-UU-AGC-ACG-A-GCAA-AACAC-CCGAUC--CCAUCCCGAACUCGGCCGUUAAG-UGCCGU-CGCG-CC-AAUGGUA-CU-GCGUC-AAAA---GAC-GUGGGAGAGUAG-GU-C-A-CCGCCA---G-ACC--------
Prosthecomicrobium enhydrum 1	------GAU-C-UGGUGGUU-AU-CGC-GCG-G-GGCC-CGAAC-CCGAUC--CCAUCCCGAACUCGACCGUUAAA-UCCCGU-CGCG-CC-AAUGGUA-CU-AAGUC-UCAA---GAC-UUGGGAGAGUAG-GU-C-G-CCGCCA---G-GUCU-------
Renobacter vaculatum 1	----------C-UGGUGGCC-AU-UGC-GAG-G-AGCC-CCAAU-UCGAUC--UCACUCCGAACUCGGCCGUUAAA-CUCCUC-AGCG-CC-GAUGGUA-CU-AUGUC-UCAA---GAC-CUGGGAGAGUAG-GU-C-G-CUGCCA---G-GCCU-------
Rhodobacter capsulatus 1	--------U-U-UGGUGGUC-AU-AGGCUUG-G-CU-A-AACAC-CCGAUC--CCAUCCCGAACUCGGCAGUUAAG-GGCCAA-CACG-CC-GAUGGUA-CU-GCGUC-UCAA---GAC-GUGGGAGAGUAG-GU-C-A-CCGCCA---A-ACC--------
Rhodobacter capsulatus 2	------CGU-U-UGGUGGUC-AU-AGCGUUG-G-CU-A-AACAC-CCGAUC--CCAUCCCGAACUCGGCCGUUAAG-GGCCAA-CACG-CC-GAUGGUA-CU-GCGUC-UCAA---GAC-GUGGGAGAGUAG-GU-C-A-CCGCCA---A-ACC--------
Rhodobacter capsulatus 3	-------GU-U-UGGUGGUC-AU-AGCGACG-G-CU-A-AACUC-CCGAUC--CCUUCCCGAACUCGGCCGAUAAG-GGCCGU-CACG-CC-AAUGGUA-CU-GCGUC-UCAA---GAC-GUGGGAGAGUAG-GU-C-A-CCGCCA---A-ACC--------
Rhodobacter sphaeroides 1	----------U-UGGUGGCC-AU-AGU-ACG-A-GUAA-AAUAC-CCGAUC--CCAUCCCGAACUCGGCAGUUAAG-UGCCGU-CGCG-CC-AAUGGUA-CU-GCGUC-UGAA---GAC-GUGGGAGAGUAG-GU-C-G-CCGCCA---G-ACC--------
Rhodobacter sphaeroides 2	------GGU-C-UGGUGGCC-AU-AGC-ACG-A-GCAA-AACAC-CCGAUC--CCAUCCCGAACUCGGCAGUUAAG-UGCCGU-CGCG-CC-AAUGGUA-CU-GCGUC-UCAA---GAC-GUGGGAGAGUAG-GU-C-G-CCGCCA---G-ACC--------
Rhodobacter sphaeroides 3	------GGU-C-UGGUGGCC-AU-AGC-ACG-A-GCAA-AACAC-CCGAUC--CCAUCCCGAACUCGGCAGUUAAG-UGCCGU-CGCG-CC-AAUGGUA-CU-GCGUC-UAA----GAC-GUGG-AGAGUAG-GU---G-C-GCCA---G-ACCUG------
Rhodopseudomonas palustris 2	-----CGGC-C-UGGUGGUU-CU-AGC-GAG-G-AGCC-UGAAC-CCGUUC--CCAUCCCGAACACGGCCGUUAAA-CUCCUC-AGCG-CC-AAUGGUA-CU-CCGUC-UCAA---GAC-GCGGGAGAGUAG-GU---G-CCGCCA---G-GCCU-------
Rhodospirillum rubrum 1	-----UGGC-C-UGGUGGUC-AU-UGC-GGG-C-UCGA-AACAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-GAGCCC-UGCG-CC-AAUGGUA-CU-GCGUC-UUAA---GGC-GUGGGAGAGUAG-GU-C-G-CCGCCA---G-GCCU-------
Rickettsia moozeri 1	------AGC-U-UGGUGGCC-AU-AGC-AUG-A-GUGA-AACAC-ACGAUC--CCAUCCCGAACUCGAACGUGAAA-CCUCAU-AGCG-CU-AAUGGUA-CU-AUGUC-AUAA---GUC-AUGGGAGAGUAA-GU-C-A-CUGCCA---A-GCUU-------
Rhodopseudomonas palustris 3	-----CGGC-C-UGGUGGUU-CU-AGC-GAG-G-AGCC-UGAAC-CCGUUC--CCAUCCCGAACACGGCCGUUAAA-CUCCUC-AGCG-CC-AAUGGUA-CU-CCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CCGCCA---G-GCCU-------
Rickettsia conorii 1	------AGC-U-UGGUGGUU-AU-AGC-AUG-A-GUGA-AACAC-ACGAUC--CCAUCCCGAACUCGAAUGUGAAA-CCUCAU-AGCG-CU-AAUGGUA-CU-AUGUC-AUAA---GGC-AUGGGAGAGUAA-GU-C-G-CUGCCA---A-GCUU-------
Rickettsia felis 1	------AGC-U-UGGUGGUU-AU-AGC-AUG-A-GUGA-AACAC-ACGAUC--CCAUCCCGAACUCGAACGUGAAA-CCUCAU-AGCG-CU-AAUGGUA-CU-AUGUC-AUAA---GGC-AUGGGAGAGUAA-GU-C-G-CUGCCA---A-GCUU-------
Rickettsia prowazekii 1	------AGC-U-UGGUGGUC-AU-AGC-AUG-A-GUGA-AACAC-ACGAUC--CCAUCCCGAACUCGAACGUGAAA-CCUCAU-AGCG-CU-AAUGGUA-CU-AUGUC-AUAA---GCC-AUGGGAGAGUAA-GU-C-G-CUGCCA---A-GCUU-------
Silicibacter pomeroyi 1	------GGU-U-UGGUGGUC-AU-AGC-GAG-C-GCAA-UACAC-CCGGUC--CCUUCCCGAACCCGGAAGUUAAG-UGCCUC-CGCG-CC-AAUGGUA-CU-CGGGC-UCAA---GCC-CCGGGAGAGUAG-GU-C-A-CCGCCA---A-ACC--------
Roseococcus thiosulfatophilus 1	-----UAGCGU-UGCGAUGC-AU-GUG-GAG-U-GUA--UACAC-CCGAUC--CCAUCGCGAACUCGGCCGUGAAA-CACUCC-AGCG-CC-UAUGGUA-CU-GCGGC-UUAA---GCG-GCGGGAGAGUCG-GU-C-A-GCGCCG---A-GCU--------
Stella humosa 1	-----CGAC-C-UGGUGGCC-CA-AGU-GAG-G-GGGC-UGCAC-CCGAUC--CCAUCCCGAACUCGGCCGUGAAA-ACCCUC-AGCG-CC-GAUGGUA-CU-GCGUC-UUAA---GGC-GCGGAAGAGUAG-GU-C-G-CCGCCA---G-G----------
Roseococcus thiosulfatophilus 2	----UGCGC-U-U-GCGCUC-GG-UGU-GUA-G-UGUA-CAUAC-CCGAUC--CCAUCCCGAGCUCGGCCGUGAAA-CACUCC-AGCG-CC-UAUUGUA-CC-GAGGC-UUAA---GCG-GCGGGAGAGUCG-GU-C-A-GCGCCA---G-GGCC-------
Sandaracinobacter sibiricus 1	-----AGCC-U-UGGUCACA-UG-UGC-CCC-U-GGUA-CCCAC-GCGAUC--CCAUCUCGAACUCGGCCGUGAAA-CCAGGU-AGCG-CC-GAUGGUA-CU-GCCGC-UUAA---GCG-CCGGAAGAGUAG-GG-U-G-CCGCCA---A-GGCU-------
Seliberia stellata 1	-------GC-C-UGGCGGCC-CU-AGC-GAA-G-CGCC-UCAAC-CCGAUC--UCAUCCCGAACUCGGCCGUUAAA-CGCUUC-AGCG-CC-AAUGGUA-CU-AUGGC-UUAA---GCC-CUGGGAGAGUAG-GU-C-G-CUGCCA---G-GCCU-------
Sinorhizobium meliloti 1	-----CGAC-C-UGGUGGUU-CU-GGC-GGG-G-UGGC-UGCAC-CCGUUC--CCAUUCCGAACACGGCCGUGAAA-CGCCCC-AGCG-CC-GAUGGUA-CU-UCGUC-UUAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCU-------
Sphingomonas ursincola 1	-----UUGC-U-UGGUCACC-AU-AGC-GUC-A-GAUA-CCCAC-GCGAUC--CCAUCUCGAACUCGGCCGUGAAA-CCUGAC-UGCG-CC-GAUGGUA-CU-ACCGC-UUAA---GCG-UUGGAAGAGUAG-G--C-G-UCGCCA---A-GGC--------
Starkeya novella 1	-----CGGC-C-UGGUGGCC-AU-UGC-GAG-G-AGCC-UGAAC-CCGAUC--CCAUCCCGAACUCGGCCGUUAAA-CUCCUC-AGCG-CC-GAUGGUA-CU-AUGUC-UUAA---GAC-CUGGGAGAGUAG-GU-C-G-CUGCCA---G-GCCU-------
Tuberoidobacter mutans 1	----------C-UGGUGGCC-AU-UGC-GAG-G-AGCC-UGAAC-CCGACU--CCACUCCGAACUCGGCCGUUAAA-CUCCUC-AGCG-CC-GAUGGUA-CU-AUGUC-UCAA---GAC-CUGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCU-------
Vibrio adaptatus 1	-----UUGC-U-UGGUGGCU-AU-AGC-GUC-U-GUGA-CCCAC-CCGAUC--CCAUCUCGAACUCGGCCGUGAAA-CCGGAC-UGCG-CC-GAUGGUA-CU-AGUGCUUCA---AGCA-CUGGAAGAGUAG-GU-C-G-UCGCCA---G-GCAU-------
Vibrio cyclosites 1	------GAC-C-UGGUGGUU-AU-GGC-GGA-G-CGGC-UGCAC-CCGAUC--CCAUUCCGAACUCGGCCGUGAAA-CGCUCC-AGCG-CU-GAUGGUA-CU-UCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCU-------
type II methanotrophic bacterium 1	------AGC-C-UGGUGACU-UU-AGC-GAA-G-UGAU-NAGAC-CGUAUC--CCAUCCCGAACUCGGCCGUCAAA-CGCUCC-AGCG-CC-AAUGGUA-CU-AUGUC-UCAA---GAC-CUGGGAGAGUAG-GU-C-G-UCGCCA---G-GCUN-------
Wolbachia endosymbiont of B. malayi 1	--------C-U-UGGUGGUU-UU-AGC-AAA-A-AUGA-AACAC-CCGAUC--CCAUCUCGAAUUCGGAAGUGAAA-CUUUUU-AGCG-CU-GAUGGUA-CU-U-----GAAA--------AGGGAGAGUAG-GU-C-G-CUGCCA---A-GUUU-------
Wolbachia endosymbiont of D. melanogaster 1	------GAC-U-UGGUGGCU-AU-AGC-AAA-A-AUGA-ACCAC-CCGAUC--UCAUCUCGAACUCGGAAGUGAAA-CUUUUU-AGCG-CU-GAUGGUA-CU-U-----GAAA--------AGGGAGAGUAG-GU-C-G-CCGCCA---A-GUUU-------
Wolbachia pipientis 1	--------C-U-UGGUGGCU-AU-AGC-AAA-A-AUGA-ACCAC-CCGAUC--UCAUUUCGAACUCGGAAGUGAAA-CUUUUU-AGCG-CC-GAUGAUA-CU-U-----AAAA--------ACCCAAAGUAG-GU-C-G-UUGCCA---A-GU---------
Xanthobacter viscosus 1	-------GC-C-UGGUGGCU-AU-GGC-GAG-G-AGUC-CGAAC-CCGAUC--CCAUCCCGAACUCGGCCGUUAAA-CUCCUC-AGCG-CC-AAUGGUA-CU-UCGUC-UCAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GCCU-------
Zymomonas mobilis 1	-----UAGC-U-UGGUGGCU-AU-AGC-GUC-A-GUGA-CCCAC-CCGAUC--CCAUUUCGAACUCGGACGUGAAA-CCUGUCCUGCG-CC-GAUGGUA-CU-GUUGC-UUAA---GCA-ACGGAAGAGUAG-GU-C-G-UCGCCA---G-GCUU-------
Achromobacter cycloclastes 1	-----CGAC-C-UGGUGGUU-CU-GGC-GGG-G-UGGC-UGCAC-CCGUUC--CCAUUCCGAACACGGCCGUGAAA-CGCCCC-AGCG-CC-GAUGGUA-CU-UCGUC-UUAA---GAC-GCGGGAGAGUAG-GU-C-G-CUGCCA---G-GUCU-------
Achromobacter denitrificans 1	------UGC-C-UGACGACC-AU-AGC-GAG-U-UGGU-CCCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGACUU-UGCG-CC-GAUGAUA-GU-GGAC--GGAC----GU-CUGUGAAAGUAG-GU-C-A-UCGUCA---G-GC---------
Achromobacter piechaudii 1	------UGC-C-UGACGACC-AU-AGC-AAG-G-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUU-CGCG-CC-GAUGAUA-GU-GGAC--GGAC----GU-CUGUGAAAGUAG-GU-C-A-UCGUCA---G-GM---------
Achromobacter xylosoxidans 2	------UGC-C-UGACGACC-AU-AGC-AAG-G-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUU-UGCG-CC-GAUGAUA-GU-GGAC--GGAC----GU-CUGUGAAAGUAG-GU-C-A-UCGUCA---G-GM---------
Acidovorax delafieldii 1	------UGC-C-UGAUGACC-AU-AGC-AAG-U-UGGU-CCCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGACUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GC---------
Acidovorax facilis 1	------UGC-C-UGAUGACC-AU-AGC-AAG-U-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGACUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GC---------
Acidovorax temperans 1	------UGC-C-UGAUGACC-AU-AGC-AAG-U-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGACUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GC---------
Acidovorax temperans 1	------UGC-C-UGAUGACC-AU-AGC-AAG-U-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGACUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GC---------
Alcaligenes faecalis 1	------UGC-U-UGACGACC-AU-AGC-GAG-G-UGGU-CCCAC-ACCUUC--CCAUCCCGAACAGGAUUGUGAAA-CGCCUU-UGCG-CC-GAUGAUA-GU-GGAC--GGAC----GU-CUGUGAAAGUAG-GU-C-A-UCGUCA---A-GC---------
Alcaligenes faecalis 2	-------GC-U-UGACGACC-AU-AGC-GAG-G-UGGU-CCCAC-ACCUUC--CCAUCCCGAACAGGAUUGUGAAA-CGCCUU-UGCG-CC-GAUGAUA-GU-GGAC--GGAC----GU-CUGUGAAAGUAG-GU-C-A-UCGUCA---A-GCU--------
Alcaligenes faecalis 3	------UGC-U-UGACGACC-AU-AGA-GCG-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGCAGUGAAA-CGACGC-AUCG-CC-GAUGGUA-GU-GUGGG-GUCU--CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-GCUU-------
Alcaligenes sp. 1	----UUAGC-C-UGACGACC-AU-AGC-AAG-G-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUU-UGCG-CC-GAUGAUA-GU-GGAC--GGAC----GU-CUGUGAAAGUAG-GU-C-A-UCGUCA---G-GCU--------
Aquaspirillum serpens 1	------UGC-U-UGGCGGCC-AU-AGC-GAG-U-UGGU-ACCAC-CCCUUC--CCUUCCCGAACAGGACCGUGAAA-CGACUC-AGCG-CC-GAUGAUA-GU-GCAG--AUCC----CU-GUGUGAAAGUAG-GU-C-U-CCGCCA---A-GCU--------
Achromobacter xylosoxidans 1	--------C-C-UGACGACC-AU-AGC-AAG-G-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUU-UGCG-CC-GAUGAUA-GU-GGAC--GGAC----GU-CUGUGAAAGUAG-GU-C-A-UCGUCA---G-GCU--------
Azoarcus sp. 1	------AGU-C-UGACGACC-AU-AGC-GUC-C-UGGC-ACCAC-CCCUUC--CCAUCCCGAACAGGACCGUGAAA-CAGGAC-CGCG-CC-GAUGAUA-GU-GCCU--AAAC----GG-GUGCGAAAGUAG-GU-C-A-UCGUCA---G-ACU--------
Bordetella bronchiseptica 1	-------GC-C-UGACGACC-AU-AGC-AAG-G-UGGU-CCCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUU-CGCG-CC-GAUGAUA-GU-GGAU--GUAC----AU-CUGUGAAAGUAG-GU-C-A-UCGUCA---G-GCU--------
Bordetella parapertussis 1	-------GC-C-UGACGACC-AU-AGC-AAG-G-UGGU-CCCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUU-CGCG-CC-GAUGAUA-GU-GGAU--GUAC----AU-CUGUGAAAGUAG-GU-C-A-UCGUCA---G-GCU--------
Burkholderia mallei 1	------UGC-C-UGAUGACC-AU-AGC-GAG-U-CGGU-CCCAC-CCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUC-CACG-CC-GAUGAUA-GU-GCGG--AUUG---CCC-GUGUGAAAGUAG-GU-A-A-UCGUCA---G-GC---------
Burkholderia pseudomallei 1	------UGC-C-UGAUGACC-AU-AGC-GAG-U-CGGU-CCCAC-CCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUC-CACG-CC-GAUGAUA-GU-GCGG--AUUG---CCC-GUGUGAAAGUAG-GU-A-A-UCGUCA---G-GC---------
Candidatus Tremblaya princeps 1	-----AGUC-C-UGACGCGC-AA--UG-AUG-C-UGGA-CCCAC-AGCUGC--CCAUUCCGAACAGACAUGUGACA-CAGCGC-GCUG-CC-GAUGAUA-GU-GCCGG-CGUGA--CCG-GUGCGAAAGCAG-GU-U-C-G-GUCA---G-GA---------
Candidatus Tremblaya princeps 2	-----AGUC-C-UGACGCGC-AA--UG-AUG-C-UGGA-ACCAC-AGCUGA--CCAUUCCGAACAGAUAUGUGACA-CAGCGC-GCGG-CC-GAUGAUA-GU-GCCGG-CGUGC--CCG-GUGCGAAAGCAG-GU-A-U--CGUCA---G-GA---------
Candidatus Tremblaya princeps 3	------GUC-C-UGACGCGC-AA--UG-AUG-C-UGGA-CCCAC-AGCUGC--CCAUUCCGAACAGACAUGUGACA-CAGCGC-GCUG-CC-GAUGAUA-GU-GCCGG-CGUGA--CCG-GUGCGAAAGCAG-GU-U-C-G-GUCA---G-GA---------
Candidatus Tremblaya princeps 5	-----AGUC-C-UGACGCGC-CA--UG-AUG-C-UGGA-CCCAC-AGCUGC--CCAUUCCGAACAGAAAUGUGACA-CAGCGC-GCGG-CC-GAUGAUA-GU-GCCGG-CGUGC--CCG-GUGCGAAAGCAG-GU-U-A--UGUCA---G-GA---------
Candidatus Tremblaya princeps 6	-----AGUC-C-UGACUCGC-AA--UG-AUG-C-UGGA-CCCAC-AGCUGC--CCAUUCCGAACAGUUAUGUGACA-CAGCAU-GCGG-CU-GAUGAUA-GU-GCCGG-CAUGC--CCG-GUGCGAAAGCAG-GU-U-U--CGUCA---G-GA---------
Bordetella pertussis 1	-------GC-C-UGACGACC-AU-AGC-AAG-G-UGGU-CCCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUU-CGCG-CC-GAUGAUA-GU-GGAU--GUAC----AU-CUGUGAAAGUAG-GU-C-A-UCGUCA---G-GCU--------
Burkholderia andropogonis 1	------UGC-C-UGAUGACC-AU-AGC-GAG-U-CGGU-SCCAC-CCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUC-CACG-CC-AAUGAUA-GU-GCGG--AUUGC---CC-GUGUGAAAGUAG-GU-A-A-UCGUCA---G-GC---------
Burkholderia caryophylli 1	------UGC-C-UGAUGACC-AU-AGC-GAG-U-UGGU-ACCAC-CCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUC-CACG-CC-GAUGAUA-GU-GCGG--AUUGC---CC-GUGUGAAAGUAG-GU-A-A-UCGUCA---G-GC---------
Burkholderia cepacia 1	-------GC-C-UGACGACC-AU-AGC-GAG-U-CGGU-CCCAC-UCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUC-UACG-CC-GAUGAUA-GU-GCGG--AUUC----CC-GUGUGAAAGUAG-GU-A-A-UCGUCA---G-GCCU-------
Burkholderia cepacia 2	------GGC-C-UGAUGACC-AU-AGC-GAG-U-CGGU-CCCAC-CCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUC-UACG-CC-GAUGAUA-GU-GCGG--AUUC----CC-GUGUGAAAGUAG-GU-A-A-UCGUCA---G-GCU--------
Burkholderia cepacia 3	------UGC-C-UGAUGACC-AU-AGC-GAG-U-CGGU-CCCAC-CCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUC-UACG-CC-GAUGAUA-GU-GCGG--AUUC----CC-GUGUGAAAGUAG-GU-A-A-UCGUCA---G-GC---------
Comamonas terrigena 1	-------GC-C-UGAUGACC-AU-AGC-GAU-U-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGAAUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GCU--------
Comamonas terrigena 2	------UGC-C-UGAUGACC-AU-AGC-GAU-U-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGAAUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GC---------
Comamonas testosteroni 1	------UGC-C-UGAUGACC-AU-AGC-AAG-U-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGACUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GC---------
Cupriavidus necator 1	------UGC-C-UGGUGACC-AU-AGC-GAG-C-UGGA-ACCAC-CCCUUC--CCAUCCCGAACAGGUCCGUGAAA-CAGCUC-CGCG-CC-GAUGAUA-GU-GCGG--AUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGCCA---G-GC---------
Delftia acidovorans 1	------UGC-C-UGAUGACC-AU-AGC-AAG-U-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGACUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GC---------
Hydrogenophaga palleronii 1	------UGC-C-UGACGACC-AU-AGC-GAG-G-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GM---------
Hydrogenophaga palleronii 1	------UGC-C-UGACGACC-AU-AGC-GAG-G-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GM---------
Hydrogenophaga pseudoflava 1	------UGC-C-UGACGACC-AU-AGC-GAG-U-UGGU-CCCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGACUU-UGCG-CC-GAUGAUA-GU-GAGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GM---------
Hydrogenophaga taeniospiralis 1	------UGC-C-UGACGACC-AU-AGC-GAG-G-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GM---------
Hydrogenophaga taeniospiralis 1	------UGC-C-UGACGACC-AU-AGC-GAG-G-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GM---------
Leptothrix discophora 1	-----AUGC-C-UGACGACC-AU-AGC-GAG-G-UGGU-CCCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUC-AGCG-CC-GAUGAUA-GU-GCGC--AUUC----GC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GCU--------
Methylophilus methylotrophus 1	--------C-U-UGGGGACA-AU-AGC-GGU-U-UGGA-ACCAC-CCCUUC--CCAUCUCGAACAGGGCCGUGAAA-CGAACU-UGCG-CC-AAUGAUA-GU-GUAC--UCUUC---GU-AUGCGAAAGUAG-GU-C-A-UCCCCA---A-GCC--------
Ralstonia pickettii 1	------UGC-C-UGGUGACC-AU-AGC-GAG-U-CGGU-ACCAC-CCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUC-CGCG-CC-GAUGAUA-GU-GCGG--AUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GC---------
Ralstonia solanacearum 1	-------GC-C-UGGUGACC-AU-AGC-GAG-U-CGGU-ACCAC-CCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUC-CGCG-CC-GAUGAUA-GU-GCGG--AUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGCCA---G-GC---------
Neisseria gonorrhoeae 1	-----AAGU-U-UGGCGGCC-AU-AGC-GAG-U-UGGU-CCCAC-GCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUC-AGCG-CC-GAUGAUA-GU-GUGG--UUCUU---CC-AUGCGAAAGUAG-GU-C-A-CUGCCA---A-AC---------
Neisseria meningitidis 1	-----AAGU-U-UGGCGGCC-AU-AGC-GAG-U-UGGU-CCCAC-GCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUC-AGCG-CC-GAUGAUA-GU-GUGG--UUCUU---CC-AUGCGAAAGUAG-GU-C-A-CUGCCA---A-AC---------
Thiomonas cuprina 1	-----ACGC-C-UGAUGACC-AU-AGC-GAG-G-UGGU-CCCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CACCUC-AGCG-CC-GAUGAUA-GU-GCGC--AUUC----GC-GUGUGAAAGUAG-GA-C-A-UCGUCA---G-GCAC-------
Thiomonas perometabolis 1	------UGC-C-UGAUGACC-AU-GGC-GAA-C-UGGA-ACCAC-CCCUUC--CCAUCCCGAACAGGGCCGUGAAA-CAGUUC-AGCG-CC-GAUGAUA-GU-GCGC--AUUC----GC-GUGUGAAAGUAG-GA-C-A-UCGUCA---G-GCU--------
Ralstonia solanacearum 2	------UGC-C-UGGUGACC-AU-AGC-GAG-U-CGGU-ACCAC-CCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUC-CGCG-CC-GAUGAUA-GU-GCGG--AUUC----CC-GUGUGAAAGUAG-GU-C-A-UCCCCA---G-GC---------
Rubrivivax gelatinosus 1	-------GC-C-UGAUGACC-AU-AGC-GAG-G-UGGU-CCCAC-UCCUUC--CCAUCCCGAACAGGAUAGUGAAA-CGCCUU-UGCG-CC-GAUGAUA-GU-GCGGG-UUC----CCC-GUGUGAAAGUAG-GA-C-A-UCGUCA---G--C---------
Thiobacillus sp. 1	------UGU-C-UGGCGGCC-AU-AGC-GCA-G-UGGA-ACCAC-CCCUUC--CCAUCUCGAACAGGACCGUGAAA-CGCUGC-AGCG-CC-UAUGAUA-GU-UGAGGGUCU---CCCU-CCGCGAAAGUCG-GU-C-A-CCGCCA---G-ACAC-------
Thiobacillus sp. 2	-------GU-U-UGGCGGCC-AU-AGC-GUC-U-UGGA-CCCAC-CCCUUC--CCAUCCCGAACAGGGACGUGAAA-CGAGAC-AGCG-CC-GAUGAUA-GU-GUGGA-UUA----CCC-AUGCGAAAGUAG-GU-C-A-CCGCCA---G-ACAA-------
Thiobacillus thioparus 1	------UGU-C-UGACGACC-AU-AGC-AGA-G-UGGA-ACCAC-CCCUUC--CCAUCCCGAACAGGACGGUGAAA-CGCUCC-CGCG-CC-AAUGAUA-GU-AGGCA-CCU----CGC-CUGUGAAAGUAG-GU-C-A-UCGUCA---G-ACCU-------
Thiomonas intermedia 1	-----AUGC-C-UGAUGACC-AU-GGC-GAA-C-UGGA-ACCAC-CCCUUC--CCAUCCCGAACAGGGCCGUGAAA-CAGUUC-AGCG-CC-GAUGAUA-GU-GCGC--AUUC----GC-GUGUGAAAGUAG-GA-C-A-UCGUCA---G-GCU--------
Variovorax paradoxus 1	------USC-C-UGAUGACC-AU-AGC-GAC-G-UGGU-ACCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGACUU-UGCG-CC-GAUGAUA-GU-GCGG--GUUC----CC-GUGUGAAAGUAG-GU-C-A-UCGUCA---G-GC---------
Vitreoscilla beggiatoides 1	------CGC-C-UGACGACC-AC-AGC-GAC-U-GUGA-ACCAC-CCGACC--CCAUCUCGAACUCGGUAGUGAAA-CCAGUC-AGCG-CC-GAUGAUA-GU-GUGGC-AUAU---GCC-AUGUGAAAGUAG-GU-C-A-UCGUCA---G-GCU--------
Vitreoscilla filiformis 1	-------GC-C-UGAUGACC-AU-AGC-AAG-G-UGGU-CCCAC-UCCUUC--CCAUCCCGAACAGGACAGUGAAA-CGCCUU-AGCG-CC-GAUGAUA-GU-GCGG--UUCUC---CC-GUGUGAAAGUAG-GA-C-A-UCGUCA---G-GCU--------
Vitreoscilla stercoraria 1	------UGU-U-UGACGACC-AU-AGC-GAG-U-UGGU-CCCAC-GCCUUC--CCAUCCCGAACAGGACCGUGAAA-CGACUU-AGCG-CC-GAUGAUA-GU-GUGG--AUUAC---CC-AUGUGAAAGUAG-GU-C-A-UCGUCA---A-ACGC-------
Desulfovibrio vulgaris 1	--------C-C-UGGCGUCC-AU-GGA-GGA-G-GGGG-UACAC-CCGAUC--CCAUUCCGAACUCGGAAGUUAAG-CCCUCC-AUCG-CC-GAUGAUA-CU-GCGGG-GUAG---CUC-GUGGGAAAGUAG-GC-C-G-ACGCCA---G-GACU-------
Desulfovibrio vulgaris 2	----UAG-C-C-UGGCGUCC-AU-GGA-GGA-G-GGGG-CACAC-CUGAUC--CCAUUCCGAACUCGGAAGUUAAG-CCCUCC-AUCG-CC-GAUGAUA-CU-GCGGG-GUAG---CUC-GUGGGAAAGUAG-GC-C-G-ACGCCA---G-GACU-------
Myxococcus coralloides 1	--------U-C-GGGUGGCA-AU-GUC-GGA-G-GGGU-CACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCCUCC-AGAG-CC-GAUGGUA-CU-CCGCGGGAAA--CCGC-GUGGGAGAGUAG-GU-C-G-CUGCCG---G-AU---------
Nannocystis exedens 1	-------UG-C-UGGUGGCU-AU-GGC-GGA-A-GGGC-CACAC-CCGAUC--CCAUCCCGAACUCGGUCGUUAAG-ACUUCC-AGCG-CC-GAUGGUA-CU-GCAGGGGCGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCA---G-CGU--------
Polyangium cellulosum 1	-------UU-C-CGGUGGUG-AU-AUC-AAG-A-AGGC-UACAC-CCGAUC--CCAUACCGAACUCGGAAGUUAAG-CUUCUU-GGAG-CC-GAUGGUA-CU-GCCAGGGCAA--CCUG-GUGGGAGAGUAG-GA-C-G-CCGCCG---G-GAC--------
Cystobacter fuscus 1	----------C-CGGUGGCA-AU-GUC-GGA-G-GGGU-CCCAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCCUCC-AGAG-CC-GAUGGUA-CU-CCGCGGGAAA--CCGC-GCGGGAGAGUAG-GU-C-G-CUGCCG---G-AU---------
Campylobacter coli 1	------UYY-G-CUGUGACU-AU-ACA-GAU-G-UGGA-AACGC-CUUGCU--CCAUCCCGAACCAAGAAGCUAAG-CACAUC-GUGG-GU-GAUGAUA-CU-AUGCC-UUAUU--GGCAGGGGGAAAGUAG-CU-C-A-UUGCGG---A-C----------
Campylobacter jejuni 1	------UYY-G-CUGUGACU-AU-AUA-GAU-G-UGGA-AACGC-CUUGCU--CCAUCCCGAACCAAGAAGCCAAG-CACAUC-GUGG-GU-GAUGAUA-CU-AUGCC-UUAUU--GGCAGGGGGAAAGUAG-CU-C-A-UUGCGG---A-C----------
Campylobacter jejuni 3	------AUG-U-CCGUGAUU-AU-ACA-GAU-G-UGGA-AACGC-CUUGCU--CCAUCCCGAACCAAGAAGCUAAG-CACAUC-GUGG-GU-GAUGAUA-CU-ACGCC-UUACU--GGCAGGGGGAAAGUAG-CU-C-A-UUGCGG---A-CUU--------
Wolinella succinogenes 1	UCCCUUUUU-C-UCGUGCCU-AU-AGA-GGA-G-AGGC-UACAC-CCAGCU--CCAUUCCGAACCUGGCAGUUAAG-CUCUCC-AUCG-CC-GAUAAUA-CU-GCAUCUUUC---AGGU-GUGGAAACGUAG-GU-G---GUGCGG---G-AGGGGGAUAAC
Helicobacter hepaticus 1	UCCCUUUUU-C-UUGUGUUU-AU-AGA-GAG-A-AGGC-AACAC-CCAGCU--CCAUUCCGAACCUGGCAGUUAAG-CUUCUC-UUCG-CC-GAUGAUA-CU-GCAUCUUUC---AGGU-GUGGGAAUGUAG-GU-C-G-AUGCAG---G-GAUAGGGAAA-
Helicobacter pylori 3	UCCCUUUUC-C-UUGUGCCU-UU-AGA-GAA-G-AGGA-ACUAC-CCAGUUAACCAUUCCGAACCUGGAAGUCAAG-CUCUUC-AUCG-CU-GAUAAUA-CU-GCUUUUUUC---AAGA-GUGGGAAUGUAG-GU-C-G-GUGCAG---G-GAUAGGGAAAU
Helicobacter pylori 2	UCCCUUUUC-C-UUGUGCCU-UU-AGA-GAA-G-AGGA-ACUAC-CCAGUUAACCAUUCCGAACCUGGAAGUCAAG-CUCUUC-AUCG-CU-GAUAAUA-CU-GCUCUUUUC---AAGA-GUGGGAAUGUAG-GU-C-G-GUGCAG---G-GAUAGGGAAAU
Thiovulum sp. 1	----UUUGG-U-UGGUGAUU-AC-AGA-GAA-A-AGGU-CACAC-UCAGCU--CCAUUUCGAACCUGAAAGUUAAG-CUUUUC-UUCG-UC-GAUAAUA-CU-GCCCCCUAC---GGGG-GUGGGACGGUAG-AU-C-G-UUGCCA---A-CCAUU------
Acidithiobacillus ferrooxidans 1	------UGU-C-UGGCGGCC-AU-AGC-GCA-G-UGGA-ACCAC-CCCUUC--CCAUCUCGAACAGGACCGUGAAA-CGCUGC-AGCG-CC-UAUGAUA-GU-UGAGGGUCU---CCCU-CCGCGAAAGUCG-GU-C-A-CCGCCA---G-AC---------
Acidithiobacillus ferrooxidans 2	------UGC-C-UGGUGGCC-AU-AGC-GAG-C-GGGA-ACCAC-CCGAUC--CCAUUCCGAACUCGGAAGUGAAA-ACGCUU-AGCG-CC-GAUGAUA-GU-AUGGGGUCU---CCCU-AUGCGAAAGUAG-GA-C-A-CUGCCA---G-GCUU-------
Acidithiobacillus ferrooxidans 3	------UGU-C-UGGCGGCC-AU-AGC-GCA-G-UGGA-ACCAC-CCCUUC--CCAUCUCGAACAGGACCGUGAAA-CGCUGC-AGCG-CC-UAUGAUA-GU-UGAGGGUCU---CCCU-CCGCGAAAGUCG-GU-C-A-CCGCCA---G-ACAC-------
Acidithiobacillus ferrooxidans 3	------UGU-C-UGGCGGCC-AU-AGC-GCA-G-UGGA-ACCAC-CCCUUC--CCAUCUCGAACAGGACCGUGAAA-CGCUGC-AGCG-CC-UAUGAUA-GU-UGAGGGUCU---CCCU-CCGCGAAAGUCG-GU-C-A-CCGCCA---G-ACAC-------
Acidithiobacillus thiooxidans 1	-----UUGU-C-UGGCGGCC-AU-AGC-GCA-G-UGGA-ACCAC-CCCUUC--CCAUCCCGAACAGGACCGUGAAA-CACUGC-AGCG-CC-UAUGAUA-GU-UGAGGGCCU---CCCU-CCGCGAAAGUCG-GU-C-A-CCGCCA---G-ACAC-------
Acinetobacter calcoaceticus 1	-------GG-C-UGGCGACC-AU-AGC-AAG-A-GUGA-ACCAC-CUGAUC--CCUUCCCGAACUCAGAAGUGAAA-CCUCUU-CGCG-CU-GAUGGUA-GU-GNGGG-UUA----CCC-AUGUGAGAGUAA-GU-C-A-UCGCCA---G-CUU--------
Acinetobacter sp. 1	--------G-C-UGGCGACA-AU-AGC-AAG-A-GUGA-ACCAC-CUGAUC--CCUUCCCGAACUCAGAAGUGAAA-CCUCUU-CGCG-CU-GAUGGUA-GU-GUGGC-GUUA---GCC-AUGUGAGAGUAA-GU-C-A-UCGCCA---G-CUU--------
Aeromonas hydrophila 1	------UGC-C-UGGCGGCC-AU-AGC-GCC-G-UGGA-ACCAC-CUGAUC--CCAUGCCGAACUCAGAAGUGAAA-CGCGGU-AGCG-CC-GAUGGUA-GU-GUGGC-AUUU---GCC-AUGCGAGAGUAG-GA-C-A-CUGCCA---G-GCA--------
Aeromonas media 1	------UGC-C-UGGCGGCC-AU-AGC-GCC-G-UGGA-ACCAC-CUGAUC--CCAUGCCGAACUCAGAAGUGAAA-CGCGGU-AGCG-CC-GAUGGUA-GU-GUGGC-AUUU---GCC-AUGUGAGAGUAG-GA-C-A-CUGCCA---G-GCAU-------
Aeromonas salmonicida 1	------UGC-C-UGGCGGCC-AU-AGC-GCC-G-UGGA-ACCAC-CUGAUU--CCAUGCCGAACUCAGAAGUGAAA-CGCGGU-AGCG-CC-GAUGGUA-GU-GUGGC-AUUU---GCC-AUGUGAGAGUAG-GA-C-A-CUGCCA---G-GCAU-------
Azotobacter vinelandii 1	------UGC-U-UGACGAUC-AU-AGA-GCG-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGCAGUGAAA-CGACGC-AUCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUAAGAGUAG-GU-C-A-UCGUCA---G-GCGC-------
Beggiatoa alba 1	------UUC-U-UGGCGACC-AU-AGC-AAA-U-AGGA-ACCAC-CCGACC--CCAUCCCGAACUCGGUAGUGAAA-CUGUUC-UGCG-CC-GAUGAUA-GU-GUGGA-UACUC--UCC-AUGUGAAAGUAG-GU-U-A-UCGCCA---A-GAGC-------
Buchnera aphidicola 1	------------UGGUAAAA-AU-AGU-GUA-G-UGGU-ACCAC-CUGAAU--CCAUUCCGAACUCAGAAGUGAAA-CGCUAU-AACG-CC-GAUGGUA-GU-ACGGGGCCU---CCCC-GUGUGAGAGUAG-GU-C-A-AAUCCA---G-GAA--------
Buchnera aphidicola 2	------UGC-C-UGGUAAAA-AU-AGU-GUA-G-UGGU-ACCAC-CUGAAU--CCAUUCCGAACUCAGAAGUGAAA-CGCUAC-AACG-CC-AAUGGUA-GU-ACGGGGUCU---CCCC-GUGUGAGAGUAG-GU-A-U-CAGCCA---G-GCAA-------
Buchnera aphidicola 3	------------UGGUAAAA-AU-AGU-GUU-A-UGGU-ACCAC-CUGAAA--CCAUGCCGAACUCAGAAGUGAAA-CAUUUC-AACG-CC-GAUGGUA-GU-GCAGGGUAU---CCCU-GUGUGAGAGUAG-GA-C-A-UUACCA---G-GUU--------
Candidatus Portiera aleyrodidarum 1	------AGC-U-UGACGAAU-AU-AGU-UUG-U-GGGA-CCAAC-CUGAAA--CCAUUCCGAACUCAGAAGUUAAA-UCACCU-AACG-CC-UAUGGUA-GU-AUGAGGUUCU--CCUC-AUGUGAGAGUAG-GU-U-A-UCGUCA---G-GCUA-------
Colwellia psychrerythraea 1	------UGU-U-UAGCGACA-AU-AGC-GCU-G-UGGU-CCCAC-CUGAUC--CCUUUCCGAACUCAGAAGUGAAA-CGCAGU-UGCG-CC-GAUGGUA-GU-GUGGG-AGUU---CCC-AUGUGAGAGUAG-GA-C-A-UUGCUA---A-ACUU-------
Colwellia psychrerythraea 2	------UGU-C-UAGCGACA-AU-AGC-GCU-G-UGGU-CCCAC-CUGAUC--CCUUUCCGAACUCAGAAGUGAAA-CGCAGU-UGCG-CC-GAUGGUA-GU-GUGGG-AGUU---CCC-AUGUGAGAGUAG-GA-C-A-UUGCUA---G-AC---------
Colwellia psychrerythraea 3	------UGC-U-UAGCGACA-AU-AGU-GCU-G-UAGA-CCCAC-CUGAUC--CCAUUCCGAACUCAGUAGUGAAA-CGCAGU-AGCG-CC-GAUGGUA-GU-GUGGG-AGUU---CCC-AUGUGAGAGUAG-GA-C-A-UUGCUA---A-GCAU-------
Coxiella burnetii 1	------UUC-C-UGGCGGCC-AU-AGC-GAG-C-GGGC-CCCAC-CUGAUU--CCAUUCCGAACUCAGAAGUGAAA-ACGCUU-AGCG-CC-GAUGAUA-GU-GUGGG-UCU----CCC-AUGCGAAAGUAG-GU-C-A-CCGCCA---G-GUU--------
Coxiella burnetii 2	------UUC-C-UGGCGGCC-AU-AGC-GAG-C-GGGC-CCCAC-CUGCUU--CCAUUCCGAACUCAGAAGUGAAA-ACGCUU-AAGGCCC-GAUGAUA-GU-GUGGG-UCU----CCC-AUGCGAAAGUAG-GU-C-A-CCGCCA---G-UUU--------
Dichelobacter nodosus 1	------UUC-C-UGAUACCC-AU-AGA-GCU-G-UGGU-ACCAC-CUGAAU--CCAUGCCGAACUCAGAAGUGAAA-CGCAGC-AUCG-CC-GAUGGUA-GU-GUGAGGUCU---CCUC-AUGUGAGAGUAG-GA-C-A-GUAUCA---G-GUUU-------
Ectothiorhodospira mobilis 1	-------UC-C-UGGCGGCC-AU-GGC-GAA-C-CGGA-ACCAC-CCGAUC--CCAUCUCGAACUCGGAAGUGAAA-CGGUUC-AGCG-CC-GAUGAUA-GU-GUGGGGCCU---CCCC-AUGUGAAAGUAG-GU-C-A-CUGCCA---G-GCAU-------
Ectothiorhodospira shaposhnikovii 1	------UAC-C-UGGCGGCC-AU-GGC-GAA-C-CGGA-ACCAC-CCGAUC--CCAUCUCGAACUCGGAAGUGAAA-CGGUUC-AGCG-CC-GAUGAUA-GU-GUGGGGCCU---CCCC-AUGUGAAAGUAG-GU-C-A-CUGCCA---G-GCAC-------
Erwinia carotovora 1	------UGC-C-UGGCGGCG-AU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Erwinia carotovora 2	-----UUAC-C-UGGCGGCG-AU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GG-A-A-CUGCCA---G-GUUU-------
Escherichia coli 10	------UGU-C-UGGCGGCA-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCUC-AUGCGAGAGUAG-GG-A-A-CUGCCA---U-GCAU-------
Esch_coli2::B	------UGC-C-UGGCGGCC-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCUC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Escherichia coli 2	------UGC-C-UGGCGGCA-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCUC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Escherichia coli 13	------UGC-C-UGGCGGCC-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCU-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-A----------
Escherichia coli 8	------UGC-C-UGGCGGCC-UU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGGCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Escherichia coli 6	------UGU-C-UGGCGGCA-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGACU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-ACAU-------
Escherichia coli 11	------UGC-C-UGGCGGCA-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAUCA-----
Esch_coli5::B	------UGU-C-UGGCGGCC-AU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-ACAU-------
Escherichia coli 4	------UGU-C-UGGCGGCA-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-ACAU-------
Escherichia coli 3	------UGC-C-UGGCGGCA-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Escherichia coli 14	------UGC-C-UGGCGGCC-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-ACAU-------
Escherichia coli 15	------UGC-C-UGGCGGCC-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAUC------
Escherichia coli 1	------UGC-C-UGGCGGCC-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Escherichia coli 5	------UGC-C-UGGCGGCC-UU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Fluoribacter bozemanae 1	-------UC-C-UGGCGACC-AU-AGC-GGU-U-UGGA-ACCAC-CUGACU--CCAUCUCGAACUCAGAAGUGAAA-CGAACC-CGCG-CC-AAUGAUA-GU-GUGAGGUCU---CCUC-AUGUGAAAGUAG-GU-C-A-GCGCCA---G-GGU--------
Grimontia hollisae 1	-----UUGC-U-UGGCGACC-AU-AGC-GCU-U-UGGA-CCCAC-CUGAUU--CCAUGCCGAACUCAGAAGUGAAA-CAGAGC-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCUU-------
Haemophilus aegyptius 1	--------U-C-UGGCGGCG-AU-AGU-GCG-G-UGGA-CCCAC-CUGAGA--CCAUACCGAACUCAGAAGUGAAA-CGCUGU-AAUG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GG-C-A-CCGCCA---G-GU---------
Haemophilus influenzae 1	--------C-C-UGGCGGCG-AU-AGU-GCG-G-UGGA-CCCAC-CUGAGA--CCAUACCGAACUCAGAAGUGAAA-CGCUGU-AAUG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GG-C-A-CCGCCA---G-G----------
Haemophilus influenzae 6	--------C-C-UGGCGGCG-AU-AGU-GCG-G-UGGA-CCCAC-CUGAGA--CCAUACCGAACUCAGAAGUGAAA-CGCUGU-AAUG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GG-C-A-CCGCCG---G-G----------
Haemophilus influenzae 4	--------C-U-UGGCGGCG-AU-AGU-GCG-G-UGGA-CCCAC-CUGAGA--CCAUACCGAACUCAGAAGUGAAA-CGCUGU-AAUG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GG-C-A-CCGCCA---G-G----------
Halorhodospira halophila 1	------UGC-C-UGGCGACC-AU-AGC-GAG-C-GGGA-ACCAC-CCGAUC--CGAUGCCGAACUCGGCAGUGAAA-CCGCUC-AGCG-CC-GAUGGUA-GU-GCGAC-CACGCU-GUC-GUGCGAGAGUAG-GU-C-A-UCGCCA---G-GCCC-------
Halothiobacillus neapolitanus 1	-------GC-C-UGGUGUCC-AU-AGA-GCG-G-UGGA-ACCAC-CUGUUC--CCAUCCCGAACACAGAAGUGAAA-CGCCGC-AUCG-CC-GAUGAUA-GU-GUGGGGUCU---CCCC-AUGUGAAAGUAG-GU-C-A-ACGCCA---G-GCUC-------
Idiomarina loihiensis 1	------UGU-C-UGGCGGCC-AU-AGC-GGU-G-UGGC-ACCAC-CUGAAU--CCAUUCCGAACUCAGAAGUGAAA-CACACC-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GU-C-A-CCGCCA---G-ACU--------
Idiomarina loihiensis 2	------UGU-C-UGGCGGCC-AU-AGC-GGU-G-UGGC-ACCAC-CUGAAU--CCAUUCCGAACUCAGAAGUGAAA-CACACC-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GU-C-A-CCGCCA---G-ACUACAA----
Legionella dumoffii 1	-------UC-C-UGGCGACC-AU-AGC-GGU-U-UGGA-ACCAC-CUGAUU--CCAUCUCGAACUCAGAAGUGAAA-CGAACC-CGCG-CC-AAUGAUA-GU-GUGAGGUCU---CCUC-AUGUGAAAGUAG-GU-C-A-UCGCCA---G-GGU--------
Legionella longbeachae 1	-------UC-C-UGGUGACU-AU-AGC-GGU-U-UGGA-ACCAC-CUGAAU--CCAUCUCGAACUCAGAAGUGAAA-CGAACA-UGCG-CC-AAUGAUA-GU-GUGAGGCUU---CCUC-AUGUGAAAGUAG-GU-C-A-UCGCCA---G-GGU--------
Legionella pneumophila 1	-------UC-U-UGGCGACU-AU-AGC-GAU-U-UGGA-ACCAC-CUGAUA--CCAUCUCGAACUCAGAAGUGAAA-CAUUUC-CGCG-CC-AAUGAUA-GU-GUGAGGCUU---CCUC-AUGCGAAAGUAG-GU-C-A-UCGCCA---G-GAU--------
Legionella pneumophila 2	-------UC-C-UGGCGACU-AU-AGC-GAU-U-UGGA-ACCAC-CUGAUA--CCAUCUCGAACUCAGAAGUGAAA-CAUUUC-CGCG-CC-AAUGAUA-GU-GUGAGGCUU---CCUC-AUGCGAAAGUAG-GU-C-A-UCGCCA---G-GGU--------
Legionella pneumophila 3	-------UC-C-UGGCGACU-AU-AGC-GAU-U-UGGA-ACCAC-CUGAUA--CCAUCUCGACCUCAGAAGUGAAA-CAUUUC-CGCG-CC-AAUGAUA-GU-GUGAGGCUU---CUUC-AUGCGAAAGUAG-GU-C-A-UCGCCA---G-GGU--------
Listonella anguillarum 1	------UGC-C-UGGCGACC-AU-AGU-GUU-G-UGGA-CCCAC-CUGAUU--CCAUGCCGAACUCAGAAGUGAAA-CACAAC-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Listonella pelagia 1	------UGC-U-UGGCGACC-AU-AGC-GUU-G-UGGA-CCCAC-CUGAUU--CCAUGCCGAACUCAGAAGUGAAA-CGCAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Mannheimia succiniciproducens 1	--------C-C-UGGCGGCG-AU-AGU-GCA-G-UGGU-CCCAC-CUGAAU--CCAUGCCGAACUCAGAAGUGAAA-CGCUGU-UAUG-CC-GAUGGUA-GU-GUGGGGUAU---CCCC-AUGUGAGAGUAG-GU-C-A-CCGCCA---G-G----------
Mannheimia succiniciproducens 2	--------C-C-UGGCGGCG-AU-AGU-GCA-G-UGGU-CCCAC-CUGAAU--CCAUGCCGAACUCAGAAGUGAAA-CGCUGU-UAUG-CC-GAUGGUA-GU-GUGGGGCAU---CCCC-AUGUGAGAGUAG-GU-C-A-CCGCCA---G-G----------
Mannheimia succiniciproducens 3	------------UGGCAGCG-AU-AGU-GCA-G-UGGA-CCCAC-CUAAUU--CCAUGCCGAACUUAGAAGUGAAA-CGCUGU-UACG-CC-GAUGGUA-GU-GUGGGGCUU---CCCC-AUGUGAGAGUAG-GU-C-A-CUGCCA----------------
Methylococcus capsulatus 1	-------GC-C-UGGCGGCC-AG-AGC-GAG-C-GGGA-ACCAC-CCGAUC--CCAUCCCGACCUCGGAAGUGAAA-CCGCUU-AGCG-CC-GAUGAUA-GU-GCAG--AAUAC---CU-GUGCGAAAGUAG-GG-A-A-CUGCCA---G-GCUC-------
Methylococcus capsulatus 2	-------NY-U-UGGUGACC-AU-AGC-GAG-C-GUGA-CCCAC-CCGAUC--CCAUCCCGAACUCGGAAGUGAAA-CCGCUU-AGUG-CC-GAUGAUA-GU-GUGGCAAUU---UGCC-AUGCGAAAGUAG-GG-A-A-UUGCMA---A-AN---------
Methylococcus capsulatus 3	-------GC-C-UGGCGGCC-AG-AGC-GAG-C-GGGA-ACCAC-CCGAUC--CCAUCCCGACCUCGGAAGUGAAA-CCGCUU-AGCG-CC-GAUGAUA-GU-GCAAG-AAUA---CCU-GUGCGAAAGUAG-GG-A-A-CUGCCA---G-GCUC-------
Methylomicrobium agile 1	-------GC-U-UGGUGGCC-AU-AGC-GAG-C-GUGA-ACCAC-CCGAUC--CCAUCCCGAACUCGGAAGUGAAA-CCGCUU-AGCG-CC-GAUGAUA-GU-GCGACAGGU---UGUC-GUGCGAAAGUAG-GG-A-A-UUGUMA---A-GCNN-------
Methylomicrobium album 1	------UGC-U-UGGUGACC-AU-AGC-GAG-C-GUGA-ACCAC-CCGAUC--CCAUCCCGAACUCGGCAGUGAAA-CCGCUU-AGCG-CC-AAUGAUA-GU-GCGACAGGU---UGUC-GUGCGAAAGUAG-GG-A-A-UCGCCA---A-GCUU-------
Methylomicrobium clara 1	-------GU-U-UGGGGACA-AU-AGC-GGU-U-UGGA-ACCAC-CCCUUC--CCAUCUCGAACAGGGCCGUGAAA-CGAACU-UGCG-CC-AAUGAUA-GU-GUACU-CUU----CGU-AUGCGAAAGUAG-GU-C-A-UCCCCA---G-GCU--------
Methylomonas methanica 1	-------NC-U-UGGUGACC-AU-AGC-GAG-C-GUGR-ACCAC-CCGAUC--CCAUCCCGAACUCGGAAGUGAAA-CCGCUU-UGCG-CC-GAUGAUA-GU-GUGGCAGUU---UGCC-AUGUGAAAGUAG-GU-C-A-UCGCMA---A-GN---------
Methylomonas rubra 1	-------GC-U-UGGUGACC-AU-AGC-AAG-C-GUGA-ACCAC-CCGAUC--CCAUCCCGAACUCGGAAGUGAAA-CCGCUU-AGCG-CC-GAUGAUA-GU-GUGGCAGGU---UGCC-AUGUGAAAGUAG-GU-C-A-UCGCMA---A-GCUN-------
Moritella marina 1	------UGU-U-UGGUGACC-AU-AGU-GUU-G-UGGU-ACCAC-CUGACU--CCAUUCCGAACUCAGUAGUGAAA-CGUAAU-AACG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU---A-UCGCCA---G-GCA--------
Pasteurella multocida 1	-----UAUC-U-UGGCGGCG-AU-AGU-GCA-G-UGGA-CCCAC-CUAACU--CCAUGCCGAACUUAGAAGUGAAA-CGCUGU-AACG-CC-GAUGGUA-GU-GUGGGGCUU---CCCC-AUGUGAGAGUAG-GA-C-A-CCGCCA---G-GU---------
Pasteurella multocida 2	-----UAUC-U-UGGCGGCG-AU-AGU-GCA-G-UGGA-CCCAC-CUAAUU--CCAUGCCGAACUUAGAAGUGAAA-CGCUGU-AACG-CC-GAUGGUA-GU-GUGGGGCUU---CCCC-AUGUGAGAGUAG-GA-C-A-CCGCCA---G-GU---------
Photobacterium angustum 1	------UGC-U-UGGCGACC-AU-AGC-GUU-A-UGGA-CCCAC-CUGAUC--CCAUGCCGAACUCAGUAGUGAAA-CGUAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Photobacterium damselae 1	------UGC-C-UGGCGACC-AU-AGC-GUU-G-UGGU-CCCAC-CUGAAU--CCAUGCCGAACUCAGAAGUGAAA-CGCAGC-AGCG-UC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Photobacterium damselae 2	------UGC-U-UGGCGACC-UU-AGC-GCU-G-UGGU-CCCAC-CUGAAU--CCAUGCCGAACUCAGAAGUGAAA-CGCAGC-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Photobacterium leiognathi 1	------UGC-U-UGGCGACC-AU-AGC-GUU-A-UGGA-CCCAC-CUGAUC--CCAUGCCGAACUCAGUAGUGAAA-CGUAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Photobacterium profundum 1	-------GU-C-UGGCGACC-AU-AGC-GCU-G-UGGC-UCCAC-CUGAUC--CCAUGCCGAACUCAGAAGUGAAA-CGCAGU-UGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GG-C-A-UCGCCA---G-GCG--------
Photobacterium profundum 2	-------GU-C-UGGCGACC-AU-AGC-GCU-G-UGGC-UCCAC-CUGAUC--CCAUGCCGAACUCAGAAGUGAAA-CGCAGU-UGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GG-C-A-UCGCCA---G-GCC--------
Photobacterium profundum 3	-----UUGU-C-UGGCGACC-AU-AGC-GCU-G-UGGC-UCCAC-CUGAUC--CCAUGCCGAACUCAGAAGUGAAA-CGCAGU-UGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GG-C-A-UCGCCA---G-G----------
Photobacterium sp. 1	------UGC-U-UGGCGACC-AU-AGC-GUU-A-UGGA-CCCAC-CUGAUC--CCUUGCCGAACUCAGUAGUGAAA-CGUAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Photorhabdus luminescens 1	------UGC-C-UGGCGGCG-AU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGCAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GA-C-A-CUGCCA---G-GC---------
Photorhabdus luminescens 2	------UGC-C-UGGCGGCG-AU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGCAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GA-C-A-CUGCUA---G-GC---------
Photorhabdus luminescens 3	------UGU-C-UGGCGGCG-AU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGCAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GG-A-A-CUGCCA---G-AC---------
Plesiomonas shigelloides 1	------UGC-C-UGGCGGCC-AU-AGU-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCUGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Proteus vulgaris 1	------UGU-C-UGGCGGCC-AU-AGC-GCA-G-UGGU-CCCAC-CUGAUC--CCAUGCCGAACUCAGAAGUGAAA-CGUUGU-AGCG-CC-GAUGAUG-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Pseudomonas aeruginosa 1	------UGC-U-UGACGAUC-AU-AGA-GCG-U-UGGA-ACCAC-CUGAUC--CCUUCCCGAACUCAGAAGUGAAA-CGACGC-AUCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-GCUC-------
Pseudomonas aeruginosa 2	------UGC-U-UGACGAUC-AU-AGA-GCG-U-UGGA-ACCAC-CUGAUC--CCUUCCCGAACUCAGAAGUGAAA-CGACGC-AUCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-GCUC-------
Pseudomonas aeruginosa 3	------UGC-U-UGACGAUC-AU-AGA-GCG-U-UGGA-ACCAC-CUGAUC--CCUUCCCGAACUCAGAAGUGAAA-CGACAC-AUCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-GCUC-------
Pseudomonas denitrificans 1	------UGC-U-UGACGACC-AU-AGA-GCA-U-UGGA-ACCAC-CUGAUC--CCAUUCCGAACUCAGCAGUGAAA-CGAUGC-AUCG-CC-GAUGGUA-GU-GUGGGGCUU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-GCGC-------
Pseudomonas fluorescens 1	------UUC-U-UGACGACC-AU-AGA-GCG-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGAAGUGAAA-CGAUGC-AUCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-GAUU-------
Pseudomonas fluorescens 2	------UUC-U-UGACGACC-AU-AGA-GCG-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGAAGUGAAA-CGAUGC-AUCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-GAU--------
Pseudomonas fluorescens 3	------UUC-U-UGACGACC-AU-AGA-GCA-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGUAGUGAAA-CGAUGC-AUCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-GAUU-------
Pseudomonas fluorescens 4	------UUC-U-UGACGACC-AU-AGA-GCA-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGCAGUGAAA-CGAUGC-AUCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-GAUU-------
Pseudomonas putida 1	------UUC-U-UGACGACC-AU-AGA-GCA-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGUAGUGAAA-CGAUGC-AUCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-GAUU-------
Pseudomonas putida 2	------UUC-U-UGACGACC-AU-AGA-GCA-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGCAGUGAAA-CGAUGC-AUCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-GAUU-------
Pseudomonas stutzeri 1	-------GC-C-UGGUGGCU-AU-GGC-GAG-G-AGGC-CUAAC-CCGAUC--CCAUCCCGAACUCGGCCGUUAAA-CUCCUC-AGUG-CC-GAUGGUA-CU-AUGUC-UUAA---GAC-CUGGGAGAGUAG-GU-C-G-UCGCCA---G-GCCU-------
Pseudomonas stutzeri 2	------G-C-U-UGACGACC-AU-AGA-GCG-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGUAGUGAAA-CGACGC-AUCG-CC-GAUGGUA-GC-UGUGGGGUC---UCCCCAUGUGAGAGUAG-GU-C-A-UCGUCA---A-GCUC-------
Pseudomonas syringae 1	------UUC-U-UGACGACC-AU-AGA-ACA-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGCAGUGAAA-CGAUGU-AUCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-GAUU-------
Pseudomonas syringae 2	------UUC-U-UGACGACC-AU-AGA-ACA-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGCAGUGAAA-CGAUGU-AUCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU-U-A-UCGUCA---A-GAUU-------
Pseudomonas syringae 3	--------C-U-UGACGACC-AU-AGA-GCA-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGUAGUGAAA-CGAUGU-AUCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-G----------
Pseudomonas syringae 4	--------C-U-UGACGACC-AU-AGA-GCA-U-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGCAGUGAAA-CGGUGU-AUCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGUCA---A-G----------
Salmonella enterica 1	------UGC-C-UGGCGGCA-CU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Salmonella enterica 3	------UGC-C-UGGCGGCA-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Salmonella enterica 4	------UGC-C-UGGCGGCA-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GC---------
Salmonella enterica 5	------UGC-C-UGGCGGCA-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Salmonella enterica 6	------UGC-C-UGGCGGCA-CU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Salmonella enterica 7	------UGU-C-UGGCGGCA-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Salmonella enterica 8	------UGU-C-UGGCGGCA-GU-AGC-ACG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-ACAU-------
Salmonella typhi 1	------------UGGCGGCA-CU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Salmonella typhimurium 1	------UGC-C-UGGCGGCA-CU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Salmonella typhimurium 2	------UGC-C-UGGCGGCC-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Salmonella typhimurium 3	-------GU-C-UGGCGGCA-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-ACA--------
Salmonella typhimurium 4	-------GC-C-UGGCGGCA-CU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCA--------
Shewanella colwelliana 1	------UGU-C-UGGAAACC-AU-AGC-AUU-G-UGGC-ACCAC-CUGAUC--CCAUCCCGAACUCAGAAGUGAAA-CGCAAU-UGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GU-C-A-UUUCCA---G-GCGC-------
Shewanella hanedai 1	------UGU-C-UGGAAACC-AU-AGC-AUU-G-UGGC-CCCAC-CUGAUC--CCAUCCCGAACUCAGAAGUGAAA-CGCAAU-CGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GU-C-A-UUUCCA---G-GCGC-------
Shewanella oneidensis 1	------UGC-U-UGGUGACA-AU-AGC-AUU-G-UGGU-CCCAC-CUGAUC--CCAUCCCGAACUCAGAAGUGAAA-CGCAAU-CGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGCCA---A-GCGC-------
Shewanella oneidensis 2	------UGU-U-UGGUGACA-AU-AGC-AUU-G-UGGU-CCCAC-CUGAUC--CCAUCCCGAACUCAGAAGUGAAA-CGCAAU-CGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GU-C-A-UCGCCA---A-GCGC-------
Shewanella putrefaciens 1	------UGU-C-UGGUGAUA-AU-AGC-AUU-G-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGAAGUGAAA-CGCAAU-UGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GU-C-A-UUGCCA---G-GCAU-------
Shigella flexneri 1	------GC--C-UGGCGGCC-GU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Shigella flexneri 2	------GU--C-UGGCGGCA-GU-UGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G-ACAU-------
Shigella flexneri 3	----------C-UGGCGGCA-GU-UGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GG-A-A-CUGCCA---G------------
Thiomicrospira pelophila 1	-------GC-U-UGGCGACC-AU-AGC-GGA-A-UGGA-ACCAC-CUGAUC--CCAUCUCGAACUCAGAAGUGAAA-CGUUCC-AGCG-CC-AAUGGUA-GU-GUGGGGUUU---CCCC-AUGCGAGAGUAG-GU-C-A-UCGCCA---A-GCU--------
Thiomicrospira sp. 1	-------GC-U-UGGGGACA-AU-AGC-AAG-A-UGGA-ACCAC-CUGAUC--CCUUUCCGAACUCAGAAGUGAAA-CGUUUU-AGCG-CC-GAUGGUA-GU-GUGUC-AGUU---GGC-AUGUGAGAGUAG-GU-C-A-UCCCCA---A-GCU--------
Thiothrix nivea 1	----UUUGC-C-UGGUGUCC-AU-AGA-GCA-C-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGAAGUGAAA-CGGUGC-AUCG-CC-GAUGGUA-GU-GUGGGGCCU---CCCC-AUGUGAGAGUAG-GU-C-A-ACGCCA---G-GCGC-------
Thiothrix sp. 1	------UGC-C-UGGUGUCC-AU-AGA-GCA-C-UGGA-ACCAC-CUGAUC--CCAUCCCGAACUCAGAAGUGAAA-CGGUGC-AUCG-CC-GAUGGUA-GU-GUGGGGCCU---CCCC-AUGUGAGAGUAG-GU-C-A-ACGCCA---G-GCGC-------
Vibrio aestuarianus 1	------UGC-U-UGGCGACC-AU-AGU-GUU-G-UGGA-CCCAC-CUGACU--CUAUGCCGAACUCAGAAGUGAAA-CGUAAU-AGCG-CC-GAUGGUA-GU-GUGGGGCUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCA--------
Vibrio alginolyticus 1	------UGC-C-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGAUUU-CCAUGCCGAACUCAGAAGUGAAA-CGAAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Vibrio cholerae 1	------UGC-U-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGAUU--CCAUCCCGAACUCAGAAGUGAAA-CGAAAC-AGCG-UC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-AA-C-A-UCGCCA---G-GC---------
Vibrio cholerae 2	------UGU-U-UGGCGACC-AU-AGC-ACU-U-UGGA-CCCAC-CUGAUU--CCAUCCCGAACUCAGAAGUGAAA-CGAAGU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GC---------
Vibrio cholerae 3	------UGC-U-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGAUU--CCAUCCCGAACUCAGAAGUGAAA-CGAAAC-AGCG-UC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-AA-C-A-UCGCCA---G-GC---------
Vibrio cholerae 4	------UGC-C-UGGCGACC-AU-AGC-GUU-U-UGGA-UCCAC-CUGACU--CCAUUCCGAACUCAGAAGUGAAA-CGAAAU-AGCG-UC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-AA-C-A-UCGCCA---G-GCA--------
Vibrio cincinnatiensis 1	------UGC-C-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGAUU--CCAUGCCGAACUCAGUAGUGAAA-CGAAAC-AGCG-UC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-AA-C-A-UCGCCA---G-GCAU-------
Vibrio diazotrophicus 1	------UGC-C-UGGCGACC-AU-AGC-GAU-U-UGGA-CCCAC-CUGAUU--CCAUGCCGAACUCAGAAGUGAAA-CGAAUU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Vibrio fischeri 1	-----UUGC-U-UGGCGACC-AU-AGC-GUU-A-UGGA-CCCAC-CUGAUC--CCAUGCCGAACUCAGAAGUGAAA-CGUAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCUU-------
Vibrio fischeri 2	------UGC-U-UAGCGACC-AU-AGC-GUU-A-UGGA-CCCAC-CUGAUC--CCAUGCCGAACUCAGAAGUGAAA-CGUAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCUA---G-GCU--------
Vibrio fischeri 3	------UGC-C-UGGCGACC-AU-AGC-AUU-A-UGGA-CCCAC-CUGAUC--CCAUGCCGAACUCAGAAGUGAAA-CGUAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Vibrio fluvialis 1	------UGC-C-UGGCGACC-AU-AGU-GUU-U-UGGA-CCCAC-CUGAUU--CCAUUCCGAACUCAGAAGUGAAA-CGAAAC-AGCG-UC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-AA-C-A-UCGCCA---G-GCAU-------
Vibrio gazogenes 1	------UGC-C-UGGCGGCC-AU-AGU-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCUGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GG-A-A-CUGCCA---G-GCAU-------
Vibrio harveyi 1	------UGC-C-UGGCGACC-AU-AGC-GAU-U-UGGA-CCCAC-CUGAUU--CCAUUCCGAACUCAGAAGUGAAA-CGAAUU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Vibrio harveyi 2	------UGC-U-UGGCGACC-AU-AGC-GAU-U-UGGA-CCCAC-CUGAUCUUCCAUUCCGAACUCAGAAGUGAAA-CGAAUU-AGCG-CC-GAUGGUA-GU-GUGGGGCUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCUU-------
Vibrio logei 1	------UGC-U-UGGCGACC-AU-AGC-GUU-A-UGGA-CCCAC-CUGAUU--CCAUGCCGAACUCAGAAGUGAAA-CGUAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Vibrio mediterranei 1	------UGC-U-UGGCGACC-AU-AGC-GUU-G-UGGA-CCCAC-CUGAUU--CCAUGCCGAACUCAGAAGUGAAA-CGCAAU-AGCG-CC-GAUGGUA-GU-GUGGGGCUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCUU-------
Vibrio metschnikovii 1	------UGC-C-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGAUU--CCAUGCCGAACUCAGAAGUGAAA-CGAAAC-AGCG-UC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-AA-C-A-UCGCCA---G-GCAU-------
Vibrio mimicus 1	------UGC-C-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGAUU--CCAUUCCGAACUCAGAAGUGAAA-CGAAAC-AGCG-UC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-AA-C-A-UCGCCA---G-GCAU-------
Vibrio natriegens 1	------UGC-C-UGGCGACC-AU-AGU-GUU-U-UGGA-CCCAC-CUGACUU-CCAUGCCGAACUCAGAAGUGAAA-CGAAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Vibrio nereis 1	------UGC-C-CGGCGACC-AU-AGC-GCU-U-UGGA-CCCAC-CUGAUUU-CCAUGCCGAACUCAGAAGUGAAA-CGAAGU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GU-C-A-CCGCCA---G-GCAU-------
Vibrio ordalii 1	------UGC-U-UGGUGAUC-AU-AGC-GUU-G-UGGA-CCCAC-CUGACU--CCAUGCCGAACUCAGAAGUGAAA-CACAAC-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCUA---G-GCAU-------
Vibrio parahaemolyticus 1	------UGC-U-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGACU--CCAUUCCGAACUCAGAAGUGAAA-CGAAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCUU-------
Vibrio parahaemolyticus 2	------UGC-U-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGAUC--CCAUUCCGAACUCAGAAGUGAAA-CGAAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCUU-------
Vibrio parahaemolyticus 3	------UAC-U-UGGCGACC-AU-AGC-ACU-U-UGGA-CCCAC-CUGACUU-CCAUUCCGAACUCAGAAGUGAAA-CGAAGU-AGCG-UC-GAUGGUA-GU-GUGGGGCUU---CCCC-AUGUGAGAGUAG-AA-C-A-UCGCCA---G-GUUC-------
Vibrio parahaemolyticus 4	------UGC-U-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGACU--CCAUUCCGAACUCAGAAGUGAAA-CGAAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GUUU-------
Vibrio parahaemolyticus 5	------UGC-C-UGGCGACC-AU-AGU-GUU-U-UGGA-CCCAC-CUGAUU--CCAUUCCGAACUCAGAAGUGAAA-CGAAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Vibrio parahaemolyticus 6	------UGC-C-UGGCGACC-AU-AGU-GUU-U-UG-A-CCCAC-CUGAUU--CCAUUCCGAACUCAGAAGUGAAA-CGAAAU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Vibrio proteolyticus 1	------UGC-C-UGGCGACC-AU-AGC-GAU-U-UGGA-CCCAC-CUGAUU--CCAUGCCGAACUCAGUAGUGAAA-CGAAUU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Vibrio sp. 1	------AGU-C-UGGAAACC-AU-AGC-AUU-G-UGGC-CCCAC-CUGAUC--CCAUCUCGAACUCAGAAGUGAAA-CGCAAU-CGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGUGAGAGUAG-GU-C-A-UUUCCA---G-GCGC-------
Vibrio tubiashii 1	------UGC-U-UGGCGACC-AU-AGC-GUU-G-UGGA-CCCAC-CUGAUU--CCAUGCCGAACUCAGAAGUGAAA-CGCAAU-AGCG-CC-GAUGGUA-GU-GUGGGGCUU---CCCC-AUGUGAGAGUAG-GA-C-A-UCGCCA---G-GCAU-------
Vibrio vulnificus 1	-----UUGC-U-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGAAU--CCAUUCCGAACUCAGAAGUGAAA-CGAAAU-AGCG-UC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-AA-C-A-UCGCCA---G-GCUU-------
Vibrio vulnificus 2	-----UUGC-U-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGAUU--CCAUUCCGAACUCAGAAGUGAAA-CGAAAU-AGCG-UC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-AA-C-A-UCGCCA---G-GCUU-------
Vibrio vulnificus 3	-----UUGC-U-UAGCGACC-AU-AGC-GCU-U-UGGA-CCCAC-CUGAUU--CCAUUCCGAACUCAGAAGUGAAA-CGAAGU-AGCG-CC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-GA-C-A-UUGCUA---G-GCU--------
Vibrio vulnificus 4	-----UUGC-U-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGAAU--CCAUUCCGAACUCAGAAGUGAAA-CGAAAU-AGCG-UC-GAUGGUA-GU-GUGGGGGUU---CCCC-AUGUGAGAGUAG-AA-C-A-UCGCCA---G-GCU--------
Vibrio vulnificus 5	------UGC-C-UGGCGACC-AU-AGC-GUU-U-UGGA-CCCAC-CUGAAC--CCAUUCCGAACUCAGAAGUGAAA-CGAAAU-AGCG-UC-GAUGGUA-GU-GUGGGGUUU---CCCC-AUGUGAGAGUAG-AA-C-A-UCGCCA---G-GCAU-------
Wigglesworthia glossinidia 1	------UUC-C-UGACAAUA-UU-AUC-GCG-A-UAGA-ACCAC-CUGAAU--CCAUACCGAACUCAGAAGUGAAA-UGUCGU-AGUU-CC-GAUGGUA-GU-GUGAGGUUU---CCUU-AUGUGAGAGUAG-GA-G-A-UUGUCA---G-GAAA-------
Xanthomonas axonopodis 1	------UCC-C-UGGUGAAA-UU-AGC-GCU-G-UGGA-ACCAC-CCGAUC--CCAUCCCGAACUCGGAAGUGAAA-CGCAGC-UGCG-CC-GAUGGUA-GU-GUGGC-UCAA---GCC-AUGCGAGAGUAG-GU-C-A-UCGCCA---G-GGGC-------
Xanthomonas campestris 1	------UCC-C-UGGUGAAA-UU-AGC-GCU-G-UGGA-ACCAC-CCGAUC--CCAUCCCGAACUCGGAAGUGAAA-CGCAGC-UGCG-CC-GAUGGUA-GU-GUGGC-UCAA---GCC-AUGCGAGAGUAG-GU-C-A-UCGCCA---G-GGGC-------
Xanthomonas oryzae 1	------UCC-C-UGGUGAAA-UU-AGC-GCU-G-UGGA-ACCAC-CCGAUC--CCAUCCCGAACUCGGAAGUGAAA-CGCAGC-UGCG-CC-GAUGGUA-GU-GUGGC-UCAA---GCC-AUGCGAGAGUAG-GU-C-A-UCGCCA---G-GG---------
Xylella fastidiosa 1	------UCC-C-UGGUGAUA-UU-AGC-GCU-G-UGGA-ACCAC-CCGAUC--CCAUCCCGAACUCGGAAGUGAAA-CGCAGC-UGCG-CC-GAUGGUA-GU-GUGGG-UCU----CCC-AUGCGAGAGUAG-GU-C-A-UUGCCA---G-GGUC-------
Xylella fastidiosa 2	------UCC-C-UGGUGAUA-UU-AGC-GCU-G-UGGA-ACCAC-CCGAUC--CCAUCCCGAACUCGGAAGUGAAA-CGCAGC-UGCG-CC-GAUGGUA-GU-GUGGG-UCU----CCC-AUGCGAGAGUAG-GU-C-G-UUGCCA---G-GGUC-------
Yersinia pestis 1	------UGC-C-UGGCGGCC-AU-AGC-GCG-G-UGGU-CCCAC-CUGAUC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GA-C-A-CUGCCA---G-GCAU-------
Yersinia pestis 5	------UAC-C-UGGCGGCA-AU-AGC-GCG-G-UGGU-CCCAC-CUGACC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GA-C-A-CUGCCA---G-GUAU-------
Yersinia pseudotuberculosis 1	------UGC-C-UGGCGGCC-AU-AGC-GCG-G-UGGU-CCCAC-CUGAUC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GA-C-A-CUGCCA---G-GCAU-------
Yersinia pseudotuberculosis 3	------UGC-C-UGGCGGCC-AU-AGC-GCG-G-UGGU-CCCAC-CUGAUC--CCAUGCCGAAUUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGUCU---CCCC-AUGCGAGAGUAG-GA-C-A-CUGCCA---G-GCAU-------
Yersinia pseudotuberculosis 5	------UGC-C-UGGCGGCC-AU-AGC-GCG-G-UGGU-CCCAC-CUGAUC--CCAUGCCGAACUCAGAAGUGAAA-CGCCGU-AGCG-CC-GAUGGUA-GU-GUGGGGGCU---CCCC-AUGCGAGAGUAG-GA-C-A-CUGCCA---G-GCAU-------
Thermotoga maritima 1	----AUCCC-C-GGGUGCCG-AU-ACU-GGG-GCGGGA-AACAC-CCGGUU--CCAUUCCGAACCCGGCCGUUAAG-CCGCCC-UGGG-CC-GAUGGUA-GUAUGGGGGCAG---CCCC-AUGCGAGAGUAG-GU-A---GCGCCC---G-GGGAU------
Thermotoga sp. 1	----AUCCC-C-GGGUGCCG-AU-ACU-GGG-GCGGGA-AACAC-CCGGUU--CCAUUCCGAACCCGGCCGUUAAG-CCGCCC-UGGG-CC-GAUGGUA-GUAUGGGGGCAG---CCCC-AUGCGAGAGUAG-GU-A---GCGCCC---G-GGGAU------
Thermotoga sp. 2	-----UCCC-C-GGGUGCUG-AU-ACU-GGG-GCGGGA-AACAC-CCGGUU--CCAUUCCGAACCCGGCCGUUAAG-CCGCCC-UGGG-CC-GAUGGUA-GUAUGGGGGCAG---CCCC-AUGCGAGAGUAG-GU-A---GCGCCC---G-GGGUU------
Thermotoga sp. 3	----AUCCC-C-GGGUGCCG-AU-ACU-GGG-GCGGGA-AACAC-CCGGUU--CCAUUCCGAACCCGGCCGUUAAG-CCGCCC-UGGG-CC-GAUGGUA-GUAUGGGGGCAA---CCCC-AUGCGAGAGUAG-GU-A---GCGCCC---G-GGGAU------
Thermotoga petrophila 1	----AUCCC-C-GGGUGCCG-AU-ACU-GGG-GCGGGA-AACAC-CCGGUU--CCAUUCCGAACCCGGCCGUUAAG-CCGCCC-UGGG-CC-GAUGGUA-GUAUGGGGGUAG---CCCC-AUGCGAGAGUAG-GU-A---GCGCCC---G-GGGAU------
Thermotoga neapolitana 1	-----UCCC-C-GGGUGCCG-AU-ACU-GGG-GCGGGA-AACAC-CCGGUU--CCAUUCCGAACCCGGCCGUUAAG-CCGCCC-UGGG-CC-GAUGGUA-GUAUGGGGGCAG---CCCC-AUGCGAGAGUAG-GU-A---GCGCCC---G-GGGAU------
Thermotoga neapolitana 2	----AUCCC-C-GGGUGCCG-AU-ACU-GGG-GCGGGA-AACAC-CCGGUU--CCAUUCCGAACCCGGCCGUUAAG-CCGCCC-UGGG-CC-GAUGGUA-GUAUGGGGGCAG---CCCC-AUGCGAGAGUAG-GU-A---GCGCCC---G-GGGAU------
Verrucomicrobium spinosum 1	--------U-C-CGGUGACG-AU-AGC-GAG-A-AGGU-CACAC-CCGUUC--CCAUACCGAACACGGAAGUGAAG-CUUCUC-AGCG-CC-GACGGUA-GU-UCGGGGCUGC--CCUC-CCGUGAGAGUAG-GA-C-G-UUGCCG---G-C----------
Actinokineospora riparia 1	-------GUAA-CGGCGGUC-AU-AGC-GGU-G-GGGA-AACGC-CCGGUC--CCAUCCCGAACCCGGAAGCUAAG-CCCACC-AGCG-CC-GAUGGUA-CU-GCACUCGUGA--GGGU-GUGGGAGAGUAG-GA-C-G-CCGCCG---G-ACU--------
Actinomadura madurae 1	------CGU-U-CGGUGGUU-UU-GGC-GAG-G-GGGA-AACAC-CCGGUC--CCAUUCCGAACCCGGAAGUUAAG-CCUCUC-AGCG-CC-GAUGGUA-CU-GCAUGGGAGA--CUGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---G-ACUU-------
Amycolatopsis lactamdurans 1	-------GUUU-CGGUGGUU-AU-AGC-GGC-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGGUA-CU-GCACUCGAAG--GGGU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACU--------
Amycolatopsis mediterranei 1	-------GUUU-CGGUGGUU-UU-AGC-GUC-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGAC-AGCG-CC-GAUGGUA-CU-GCAACCGAAG--GGUU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACU--------
Amycolatopsis methanolica 1	-------GUUU-CGGUGGUU-AU-GGC-GGU-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGGUA-CU-GCACCCCCGC--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACA--------
Amycolatopsis orientalis 1	-------GUUU-CGGUGGUC-AU-AGC-GUC-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGAC-AGCG-CC-GAUGGUA-CU-GCAACCGAAG--GGUU-GUGGGAGAGUAG-GA-C-A-CCGCCG---G-ACU--------
Arthrobacter globiformis 1	-------AU-UACGGCGGUC-AU-AGC-GUG-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-ACCCAC-AGCG-CC-GAUGGUA-CU-GCACCCGGGA--GGGU-GUGGGAGAGUAG-GU-C-A-CCGCCG---G-ACAC-------
Arthrobacter globiformis 2	-------GU-UACGGCGGUC-AU-AGC-GUG-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-ACCCAC-AGCG-CC-GAUGGUA-CU-GCACCCGGGA--GGGU-GUGGGAGAGUAG-GU-C-A-CCGCCG---G-ACACU------
Arthrobacter luteus 1	-------GU-UACGGCGGUC-AU-AGC-GAA-G-GGGA-AACGC-CCGGUC--CCAUACCGAACCCGGAAGCUAAG-CCCUUC-AGCG-CC-GAUGGUA-CU-GCCCUGAAGA--CGGG-GUGGGAGAGUAG-GA-C-G-CCGCCG---G-ACAAC------
Arthrobacter oxydans 1	-------AU-UACGGCGGUC-AU-AGC-GUG-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-ACCCAC-AGCG-CC-GAUGGUA-CU-GCACCCGGGA--GGGU-GUGGGAGAGUAG-GU-C-A-CCGCCG---G-ACAC-------
Arthrobacter polychromogenes 1	-------AU-UACGGCGGUG-AU-AGC-GUG-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-ACCCAC-AGCG-CC-GAUGGUA-CU-GCACCCGGGA--GGGU-GUGGGAGAGUAG-GU-C-A-CCGCCG---G-ACAC-------
Brevibacterium helvolum 1	-------AU-UACGGCGGUC-AU-AGC-GUG-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-ACCCAC-AGCG-CC-GAUGGUA-CU-GCACCCGGGA--GGGU-GUGGGAGAGUAG-GU-C-A-CCGCCG---G-AAA--------
Clavibacter michiganensis 1	-------GUUU-CGGCGGCC-AU-AGC-GAG-A-GGGA-AACGC-CCGGUC--ACAUUCCGAACCCGGAAGCUAAG-ACUCUC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-A-CCGCCG---G-ACU--------
Bifidobacterium longum 1	------UUU-G-CGGCGGCC-AU-GGC-CCA-G-GUGA-GACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-GCCUGG-CACG-GC-GAUGGUA-CU-GCACCCGACA--GGGU-GUGGGAGAGUAG-CA-C-G-CCGCCG---C-AUC--------
Bifidobacterium longum 2	------UUU-G-CGGCGGCC-AU-GGC-CCA-G-GUGA-GACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-GCCUGG-CACG-GC-GAUGGUA-CU-GCACCCGACA--GGGU-GUGGGAGAGUAG-CA-C-G-CCGCCG---C-AUCA-------
Bifidobacterium longum 3	------UUU-G-CGGCGGCC-AU-GGC-CCA-G-GUGA-GACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-GCCUGG-CACG-GC-GAUGGUA-CU-GCACCCGACA--GGGU-GUGGGAGAGUAG-CA-C-G-CCGCCG---C-ACC--------
Brevibacterium casei 1	-----UUUU-G-CGGUGGUG-AU-AGU-GGU-G-GGGA-AACGC-CCGGUUAACCGUUCCGAUCCCGGUAGCUAAG-CCCAUG-UAUG-CU-GAUGGUA-CU-GCAACUUGGU--GGUU-GUGGGAGAGUAA-GU-G-A-CUGCCG---C-AAU--------
Brevibacterium linens 1	-----UUUU-G-CGGUGGUG-AU-AGU-GGU-G-GGGA-AACGC-CCGGUUAACCGUUCCGAUCCCGGUAGCUAAG-CCCAUU-CGCG-CU-GAUGGUA-CU-GCAACUUGGU--GGUU-GUGGGAGAGUAG-GU-G-A-CUGCCG---C-AAU--------
Brevibacterium linens 2	-----UUUU-G-CGGUGGUG-AU-AGU-GGU-G-GGGA-AACGC-CCGGUUAACCGUUCCGAUCCCGGUAGCUAAG-CCCAUU-CGCG-CU-GAUGGUA-CU-GCAACUUGGU--GGUU-GUGGGAGAGUAA-GU-G-A-CUGCCG---C-AAU--------
Cellulomonas biazotea 1	-------GU-UACGGCGGUC-AU-AGC-GAA-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCUUC-AGCG-CC-GAUGGUA-CU-GCACUCGCCA--GGGU-GUGGGAGAGUAG-GA-C-G-CCGCCG---G-ACA--------
Cellulosimicrobium cellulans 1	------GUU-A-CGGCGGUC-AC-AGC-GAA-G-GGGA-AACGC-CCGGUC--CCAUACCGAACCCGGAAGCUAAG-CCCUUC-AGCG-CC-GAUGGUA-CU-GCCCUGGAGA--CGGG-GUGGGAGAGUAG-GU-C-G-CCGCCG---G-ACA--------
Corynebacterium diphtheriae 1	-----UGUG-U-UGGUGGUU-AU-UGU-GUC-G-GGGG-UACGC-CCGGUC--CCUUUCCGAACCCGGAAGCUAAG-CCCGAU-UGCG-CU-GAUGGUA-CU-GCACCUGGGA--GGGU-GUGGGAGAGUAG-GU-C-G-CCGCCA---A-CCU--------
Corynebacterium diphtheriae 2	-----UGUG-U-UGGUGGUU-AU-UGU-GUC-G-GGGG-UACGC-CCGGUC--CCUUUCCGAACCCGGAAGCUAAG-CCCGAU-UGCG-CU-GAUGGUA-CU-GCACCUGGGA--GGGU-GUGGGAGAGUAG-GU-C-G-CUGCCA---A-CCU--------
Corynebacterium efficiens 1	-----UGUG-U-CGGUGGUG-AU-AGU-AGC-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGGU-UACG-CU-GAUGGUA-CU-GCACUCGGGA--GGGU-GUGGGAGAGUAG-GU-G-A-CCGCCG---A-CC---------
Corynebacterium glutamicum 1	-----UGUG-U-CGGUGGUG-AU-AGU-AGC-A-GGGA-AACGC-CCGGUC--CCUUUCCGAACCCGGAAGCUAAG-CCUGGU-UACG-CU-GAUGGUA-CU-GCACUCGGGA--GGGU-GUGGGAGAGUAG-GU-U-A-CCGCCG---A-CC---------
Corynebacterium glutamicum 2	-----UGUG-U-CGGUGGUG-AU-AGU-AGC-A-GGGA-AACGC-CCGGUC--CCUUUCCGAACCCGGAAGCUAAG-CCUGGU-UACG-CU-GAUGGUA-CU-GCACUCGGGA--GGGU-GUGGGAGAGUAG-GU-U-A-CCGCCG---A-CCA--------
Corynebacterium jeikeium 1	-----UUUG-U-CGGUGGUUGUU-AGC-GGU-G-GGGU-CACGC-CCGGUC--CCUUUCCGAACCCGGAAGCUAAG-CCUACC-UGCG-CU-GAUGGUA-CU-GCACCUGGGA--GGGU-GUGGGAGAGUAA-GU-C-A-CCGCCG---G-C----------
Corynebacterium jeikeium 2	-----UUUG-U-CGGUGGUUGUU-AGC-GGU-G-GGGU-CACGC-CCGGUC--CCUUUCCGAACCCGGAAGCUAAG-CCUACC-UGCG-CU-GAUGGUA-CU-GCACCUGGGA--GGGU-GUGGGAGAGUAA-GU-C-A-CCGCCG---A-C----------
Corynebacterium variabile 1	-----UUUG-U-CGGUGGUG-UU-AGC-GGU-G-GGGU-CACGC-CCGGUC--CCUUUCCGAACCCGGAAGCUAAG-CCUGCC-UGCG-CC-GAUGGUA-CU-GCACCUGGGA--GGGU-GUGGGAGAGUAG-GA-C-C-CCGCCG---G-CAU--------
Corynebacterium xerosis 1	-----CGUG-U-CGGUGGUU-AU-AGC-GGU-G-GGGU-CACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCACC-UGCG-CC-GAUGGUA-CU-GCACCUGGGA--GGGU-GUGGGAGAGUAG-GU-C-A-CCGCCG---G-CCAA-------
Corynebacterium xerosis 2	-----CGUG-U-CGGUGGUUA-U-AGC-GGU-G-GGGU-CACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCACC-UGCG-CC-GAUGGUA-CU-GCACCUGGGA--GGGU-GUGGGAGAGUAG-GU-C-A-CCGCCG---G-CCA--------
Crossiella cryophila 1	------GUU-U-CGGUGGUC-AU-AGC-GGU-U-GGGG-AACAC-CCGGUC--CCAUUCCGAACCCGGUAGUUAAG-CCUUCC-AGCG-CC-GAUGGUA-CU-GCACUCGUGA--GGGU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Curtobacterium citreum 1	------GUU-C-CGGUGGUG-AU-AGC-GAG-A-GGGA-AACGC-CCGGUG--AGAUUCCGAACCCGGAAGCUAAG-CCUCUC-AGCG-CC-GAUGGUA-CU-GCAAGGGGGA--CCUU-GUGGGAGAGUAG-GA-C-G-CCGCCG---G-ACUCA------
Dactylosporangium aurantiacum 1	-------GU-UACGGCGGCC-AU-AGC-GGA-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-GCACCCGAGA--GAGU-GUGGGAGAGUAG-GA-C-G-CCGCCG---G-ACAA-------
Frankia sp. 1	------GGU-C-CGGCGGCC-AU-AGC-GGU-G-GGUA-AAUGC-CCGGUC--UCAUUCCGAACUCGGAAGCUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-GCACCCGAGA--GAGU-GUGGGAGAGUAG-GA-C-G-CCGCCG---G-ACCA-------
Frankia sp. 2	------GUU-U-CGGUGGUU-UU-GGC-GAA-G-GGGA-AACGC-CCGGUC--UCAUUCCGAACCCGGAAGCUAAG-CUCUUC-AGCG-CC-GAUGGUA-CU-GCAUGGGGGA--CUGU-GUGGGAGAGUAG-GA-C-G-CCGCCG---G-ACU--------
Frankia sp. 3	------GUU-U-CGGUGGUU-UU-GGC-GAA-G-GGGA-AACGC-CCGGUC--UCAUUCCGAACCCGGAAGCUAAG-CUCUUC-AGCG-CC-GAUGGUA-CU-GCAUGGGGGA--CUGU-GUGGGAGAGUAG-GA-C-G-CCGCCG---G-AC---------
Geodermatophilus obscurus 1	------GUU-U-CGGUGGUC-AU-GGC-GAG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUUC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-AA-C-A-CCACCG---A-ACA--------
Herbidospora cretacea 1	-------GU-UACGGCGGUU-AU-GGC-GGA-G-GGGA-AACAC-CCGGUU--ACAUUCCGAACCCGGAAGUUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-GCACCGGGGA--CGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---G-ACA--------
Kibdelosporangium aridum 1	------GUU-A-CGGUGGUU-AU-AGC-GAA-G-AGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CUCUUC-AGCG-CC-GAUGGUA-CU-GCACUGGGUA--CGGU-GUGGGAGAGUAG-GU-C-G-CCGCCG---U-AAU--------
Kutzneria albida 1	------GUU-U-CGGUGGUG-UU-GGC-GGA-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCUCC-UGCG-CC-GAUGGUA-CU-GCACUCGUGA--GGGU-GUGGGAGAGUAG-GA-C-G-CUGCCG---A-ACA--------
Kutzneria viridogrisea 1	-------GUUU-CGGUGGUG-UU-GGC-GGA-G-GGGA-AACGC-CCGGUC--CCACAUCGAACCCGGAAGCUAAG-CCCUCC-UGCG-CC-GAUGGUA-CU-GCACUCGUGA--GGGU-GUGGGAGAGUAG-GA-C-G-CUGCCG---A-ACA--------
Leifsonia aquatica 1	-------GU-UUCGGCGGCC-AU-AGC-GAG-A-GGGA-AACGC-CCGGUU--AUAUUCCGAACCCGGAAGCUAAG-ACUCUC-UGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-A-CCGCCG---G-ACU--------
Leifsonia xyli 1	------GUU-U-CGGCGGCC-AU-AGC-GAG-A-GGGA-AACGC-CCGGUC--ACAUUCCGAACCCGGAAGCUAAG-ACUCUC-UGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-A-CCGCCG---G-ACUU-------
Microbacterium testaceum 1	-------GU-UUCGGCGGCC-AU-AGC-GAG-A-GGGA-AACGC-CCGGUU--AUAUUCCGAACCCGGAAGCUAAG-CCUCUC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-A-CCGCCG---G-ACU--------
Micrococcus luteus 1	-------GU-UACGGCGGUC-AU-AGC-GUG-G-GGGA-AACGC-CCGGUU--CCAUUCCGAACCCGGAAGCUAAG-GCCCAC-AGCG-CC-GAUGGUA-CU-GCAACCGGGA--GGUU-GUGGGAGAGUAG-GU-C-G-CCGCCG---G-ACAA-------
Micrococcus luteus 2	-------GU-C-UGGCGGCC-AU-AGC-GUG-G-GGGA-AACGC-CCGGUC--CCAUCCCGAACCCGGAAGCUAAG-CCCCAU-AGCG-CC-GAUGGUA-CU-GCAACCGGGA--GGUU-GUGGGAGAGUAG-GU-C-G-CCGCCG---G-ACA--------
Micrococcus luteus 3	-------UU-U-CGGUGGUC-AU-AGC-GUG-G-GGGA-AACGC-CCGGUC--CCAUGCCGAACCCGGUAGCUAAG-WCCCAC-AGCG-CU-GAUGGUA-CU-GCACUCGGUA--GGGU-GUGGGAGAGUAA-GU-C-A-CCGCCG---G-AAU--------
Micrococcus luteus 4	-------GUUA-CGGCGGCU-AU-AGC-GUG-G-GGGA-AACGC-CCGGCC--GUAUAUCGAACCCGGAAGCUAAG-CCCCAU-AGCG-CC-GAUGGUU-ACUGUAACCGGGA--GGUU-GUGGGAGAGUAG-GU-C-G-CCGCCG---U-GA---------
Microtetraspora glauca 1	-------GU-UACGGCGGUU-AU-AGC-GGU-A-GGGA-AACAC-CCGGUU--ACAUUCCGAACCCGGAAGUUAAG-CCUUCC-AGCG-CC-GAUGGUA-CU-GCACUGGGGA--CGGU-GUGGGAGAGUAG-GA-C-G-CCGCCG---G-AAAU-------
Mycobacterium avium 1	--------U-UACGGCGGCC-AC-AGC-GAC-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGUC-AGCG-CC-GAUGAUA-CU-GCCC--AUAC----GG-GUGGAAAAGUAG-GA-C-A-CCGCCG---A-ACA--------
Mycobacterium bovis 1	-------GU-UACGGCGGCC-AC-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGAUA-CU-GCCC--CUACC---GG-GUGGAAAAGUAG-GA-C-A-CCGCCG---A-ACA--------
Mycobacterium bovis 2	--------U-UACGGCGGCC-AC-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGAUA-CU-GCCC--CUCC----GG-GUGGAAAAGUAG-GA-C-A-CCGCCG---A-ACA--------
Mycobacterium bovis 3	--------U-UACGGCGGCC-AU-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUGCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGAUA-CU-GCCCC-UCC----GGG-GUGGAAAAGUAG-GG-C-A-CCGCCG---A-ACA--------
Mycobacterium flavescens 1	-------GU-UACGGCGGUCAGU-AGC-GGC-A-GGGA-AACGC-CCGGAC--CCAUCCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-AAUGGUA-CU-GCCC--AGCAC---GG-GUGGAAAAGUAG-GG-C-G-CCGCCG---A-ACAC-------
Mycobacterium leprae 1	-------GU-UACGGUGGCC-AC-AGC-GAU-A-GGGA-AACGC-CCGGUC--CCAUACCGAACCCGGAAGCUAAG-CCUGUC-AGCG-CC-GAUGAUA-CU-GCCC--AUUC----GG-GUGGAAAAGUAG-GA-C-A-CUGCCG---A-ACA--------
Mycobacterium leprae 2	-------GU-UACGGUGGCC-AC-AGC-GAU-A-GGGA-AACGC-CCGGUC--CCAUACCGAACCCGGAAGCUAAG-CCUGUC-AGCG-CC-GAUGAUA-CU-GCCC--AUUC----GG-GUGGAAAAGUAG-GA-C-A-CUGCCG---A-ACAU-------
Mycobacterium nonchromogenicum 1	-------GU-UACGGCGGAA-AU-AGC-GAC-A-GGRA-AACGC-CCGGUC--CCAUCCCGAACCCGGAAGCUAAG-CCUGUC-AGCG-CC-GAUGAUA-CU-GCCC--ACAC----GG-GUGGAAAAGUAG-GA-C-A-CCGCCG---A-ACA--------
Mycobacterium phlei 1	-------GU-UACGGCGGUCAAU-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUCCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-AAUGAUA-CU-ACCC--UUCC----GG-GUGGAAAAGUAG-GA-C-A-CCGCCG---A-ACAU-------
Mycobacterium phlei 2	-------GU-UACGGCGGUCAAU-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUCCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-AAUGAUA-CU-GCCC--UCACC---GG-GUGGAAAAGUAG-GA-C-A-CCGCCG---A-ACAC-------
Mycobacterium smegmatis 1	-------GU-UACGGCGGUCCAU-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUCCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGAUA-CU-ACCC--UUCC----GG-GUGGAAAAGUAG-GA-C-A-CCGCCG---A-ACAU-------
Mycobacterium smegmatis 2	-------GU-UACGGCGGUCCAU-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUCCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGAUA-CU-ACCC--AUCC----GG-GUGGAAAAGUAG-GA-C-A-CCGCCG---A-ACAC-------
Mycobacterium smegmatis 3	-------GU-UACGGCGGUCCAU-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUCCCGAACCCGGAAGCUAAG-CCUGCC-AGC--CC-GAUGAUA-CU-ACCC--UUCC----GG-GUGGAAAAGUAG-GA-C-A-CCGCCG---A-ACAC-------
Mycobacterium tuberculosis 1	--------U-UACGGCGGCC-AC-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGAUA-CU-GCCC--CUCC----GG-GUGGAAAAGUAG-GA-C-A-CCGCCG---A-ACA--------
Mycobacterium tuberculosis 2	-------GU-UACGGCGGCC-AC-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGAUA-CU-GCCC--CUCC----GG-GUGGAAAAGUAG-GA-C-A-CCGCCG---A-ACA--------
Mycobacterium tuberculosis 3	-------GU-UACGGCGGCC-AC-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGAUA-CU-GCCC--CUCC----GG-GUGGAAAAGUAG-GA-C-A-CCGCCG---A-ACAU-------
Mycobacterium tuberculosis 4	--------U-UACGGCGGCC-AU-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUGCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGAUA-CU-GCCCC-UCC----GGG-GUGGAAAAGUAG-GG-C-A-CCGCCG---A-ACA--------
Nocardia asteroides 1	------GUU-A-CGGCGGUU-AU-AGC-GGU-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-GCCACC-UGCG-CC-GAUGGUA-CU-GCACUCGACA--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---G-AACA-------
Nocardia farcinica 1	-------UU-A-CGGCGGUC-AU-AGC-GGU-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGGUA-CU-GCACUCGACA--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---G-AACAUCC----
Nocardioides albus 1	-------GU-UACGGCGGCC-AU-AGC-GAA-G-GGGA-AAUAC-CCGGUC--CCAUCCCGAACCCGGAAGUCAAG-CCCUUC-AGCG-CC-GAUGGUA-CU-GCAACCGAGA--GGCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---G-ACA--------
Nocardiopsis dassonvillei 1	-------UU-G-UGGUGGUU-AU-UGC-UGG-A-GGGU-CACAC-CCGGUC--UCUUUCCGAACCCGGUCGUUAAG-UCUCUU-UGCG-CU-GAUGGUA-CU-GCCCUGUGG---UGGG-GUGGGAGAGUAG-GU-C-G-CUGCCA---C-GGU--------
Oerskovia turbata 1	-------GU-UACGGCGGUC-AU-AGC-GAG-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUCUC-AGCG-CC-GAUGGUA-CU-GCCCUGGAGA--CGGG-GUGGGAGAGUAG-GU-C-G-CCGCCG---G-ACA--------
Pimelobacter simplex 1	-------GU-UACGGCGGCC-AU-AGC-GGC-G-GGGA-AACAC-CCGGUC--CCAUGCCGAACCCGGAAGUUAAG-CCUGCC-AGCG-CC-GAUGGUA-CU-GCAACCGAGA--GGCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---G-ACA--------
Planobispora longispora 1	-------GU-UACGGCGGUU-AU-AGC-GGA-G-GGGA-AACAC-CCGGUU--ACAUUCCGAACCCGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-CU-GCACUCGGGA--GGGU-GUGGGAGAGUAG-GU-C-G-CCGCCG---G-ACA--------
Prauserella rugosa 1	-------GUUU-CGGUGGUG-AU-AGC-GGU-A-GGGG-UACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGGUA-CU-GCACUCGUAG--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACU--------
Propionibacterium acnes 1	-------UU-UCCGGUGGCC-AU-AGU-GGA-A-GGGA-AACAC-CCGGUC--CCAUUCCGAACCCGGUCGUUAAG-CCUUCC-AACG-CU-GAUGGUA-CU-GCACGAGGGA--UCGU-GUGGGAGAGUAA-GA-C-G-CUGCCG---G-AAUAC------
Pseudonocardia compacta 1	------GUG-U-CGGUGGUC-AU-GGC-GGA-G-GGGA-AACGC-CCGGUC--CCAUCCCGAACCCGGAAGCUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-GCACUCGUCA--GGGU-GUGGGAGAGUAG-GU-C-G-CCGCCG---A-CAU--------
Pseudonocardia halophobica 1	-------UG-U-CGGUGGUC-AU-UGC-GGA-G-GGGG-AACGC-CCGGUC--CCAUCCCGAACCCGGAAGCUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-GCACUCGCCA--GGGU-GUGGGAGAGUAG-GU-C-G-CCGCCG---A-CA---------
Pseudonocardia hydrocarbonoxydans 1	------GUG-U-CGGUGGUU-AU-GGC-GGA-G-GGGG-AACGC-CCGGUC--CCAUCCCGAACCCGGAAGCUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-GCACCUGUCA--GGGU-GUGGGAGAGUAG-GU-C-G-CCGCCG---A-CAU--------
Pseudonocardia thermophila 1	------GUG-U-CGGUGGUU-AU-GGC-GGA-G-UGGG-AACGC-CCGGUC--CCAUCCCGAACCCGGAAGCUAAG-CACUCC-AGCG-CC-GAUGGUA-CU-GCACUCGCUA--GGGU-GUGGGAGAGUAG-GU-C-G-CCGCCG---A-CA---------
Renibacterium salmoninarum 1	-------GU-UACGGCGGCC-AU-AGC-GUG-G-GGGA-AACGC-CCGGAC--CCAUCUCGAACCCGGAAGCUAAG-ACCCAC-AGCG-CC-CAUGGUA-CU-GCACUCGCGA--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---G-ACA--------
Rhcoc_fas1::B	-------GU-UACGGCGGCC-AU-AGC-GGA-G-GGGA-AACCGCCCGGUC--CCAUUCCGAA-CCGGAAGCUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-GCACUCGACA--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACU--------
Rhodococcus erythropolis 1	-------GU-UACGGCGGUC-AU-AGC-GAA-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCUUC-AGCG-CC-GAUGGUA-CU-GCACUCGACA--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---G-ACAC-------
Rhodococcus erythropolis 2	-------GU-UACGGCGGUC-AU-AGC-GAA-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCUUC-AGCG-CC-GAUGGUA-CU-GCACUCGACG--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACA--------
Rhodococcus fascians 1	-------GU-UACGGCGGCC-AU-AGC-GGA-G-GGGA-AACCGCCCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-GCACUCGACA--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACU--------
Rhodococcus fascians 2	-------GU-UACGGCGGCC-AU-AGC-GGA-G-GGGA-AACCGCCCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-GCACUCGACA--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACA--------
Rhodococcus rhodochrous 1	-------GU-UACGGCGGCC-AU-AGC-GAC-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGUC-UGCG-CC-GAUGGUA-CU-GCACUCGACA--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACA--------
Saccharomonospora azurea 1	------GUU-U-CGGUGGUU-AU-AGC-GGU-G-GGGA-CACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCACC-AGCG-CC-GAUGGUA-CU-GCACUCGAAG--GAGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACA--------
Saccharomonospora cyanea 1	------GUU-U-CGGUGGUC-AC-AGC-GGUAG-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCACC-AGCG-CC-GAUGGUA-CU-GCACCCGAAG--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACA--------
Saccharomonospora glauca 1	------GUU-U-CGGUGGUA-AU-AGC-GGU-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCACC-AGCG-CC-GAUGGUA-CU-GCACCCGCCG--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACA--------
Saccharomonospora sp. 1	------GUU-U-CGGUGGUA-AU-AGC-GGU-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCACC-AGCG-CC-GAUGGUA-CU-GCACCCGCCG--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACA--------
Saccharopolyspora erythraea 1	------GUUGU-CGGUGGCG-AU-AGC-GGU-G-GGGA-AACGC-CCGGUC--CCUUUCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGGUA-CU-GUACUCGAUA--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---ACAAU--------
Saccharopolyspora gregorii 1	------AUUGU-CGGUGGUU-UU-AGC-GGA-GCGGGG-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-GCACUCGAUA--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---ACAAU--------
Saccharopolyspora hirsuta 1	------GUUGU-CGGUGGCG-AU-GGC-GGG-G-AGGG-UCCGC-CCGGUC--CCAUUCCGAACCCGGUAGCUAAG-CUCCCC-AGCG-CU-GAUGGUA-CU-GCACUCGACA--GGGU-GUGGGAGAGUAA-GA-C-A-CCGCCG---ACACA--------
Saccharopolyspora hordei 1	------GUUGU-CGGUGGCG-AU-AGC-GGG-G-AGGG-UCCGC-CCGGUC--CCAUUCCGAACCCGGUAGCUAAG-CUCCCC-AGCG-CU-GAUGGUA-CU-GCACUCGGUA--GGGU-GUGGGAGAGUAA-GA-C-A-CCGCCG---ACACA--------
Saccharopolyspora rectivirgula 1	------GUUGU-CGGUGGCG-AC-AGC-GGG-G-AGGG-UCCGC-CCGGUC--CCAUACCGAACCCGGAAGCUAAG-CUCCCC-AGCG-CC-GAUGGUA-CU-GCACCCGGUG--GGGU-GUGGGAGAGUAG-GA-C-A-CCGCCG---ACACA--------
Saccharothrix australiensis 1	------GUU-U-CGGUGGUU-AU-GGC-GGA-G-GGGG-AACAC-CCGGUC--CCAUUCCGAACCCGGUAGUUAAG-CCUUCC-AGCG-CC-GAUGGUA-CU-GCACUCGUGA--GGGU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Saccharothrix mutabilis 1	------GUU-U-CGGUGGUC-AU-GGC-GGA-G-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-UCCUCC-AGCG-CC-GAUGGUA-CU-GCAUGCGUGA--GCGU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces ambofaciens 1	-------GUUU-CGGUGGUC-AU-AGC-GUU-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces avermitilis 1	---------UU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces avermitilis 2	---------UU-CGGUGAUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-UCGCCG---A-ACA--------
Streptomyces avermitilis 3	---------UU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACU--------
Streptomyces avermitilis 4	---------UU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces avermitilis 5	---------UU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces brasiliensis 1	-------GUUU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACA--------
Streptomyces cinereus 1	-------GUUU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUCAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-A-CCGCCG---A-ACA--------
Streptomyces coelicolor 1	------UGUUU-CGGUGGUC-AU-AGC-GUA-G-GGGA-AACGC-CCGGUU--ACAUUUCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces coelicolor 2	-------GUUU-CGGUGGUC-AU-AGC-GUA-G-GGGA-AACGC-CCGGUU--ACAUUUCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-AC---------
Streptomyces coelicolor 3	-------GUUU-CGGUGGUC-AU-AGC-GUA-G-GGGA-AACGC-CCGGUU--ACAUUUCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACU--------
Streptomyces coelicolor 4	------GGUUU-CGGUGGUC-AU-AGC-GUA-G-GGGA-AACGC-CCGGUU--ACAUUUCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces coelicolor 5	-------GUUU-CGGUGGUC-AU-AGC-GUA-G-GGGA-AACGC-CCGGUU--ACAUUUCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A------------
Streptomyces coelicolor 6	--------UUU-CGGUGGUC-AU-AGC-GUA-G-GGGA-AACGC-CCGGUU--ACAUUUCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces diastaticus 1	-------GUUU-CGGUGGUC-AU-UGC-GUU-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUUC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces griseus 1	-------GUUU-CGGUGGUC-AU-AGC-GUU-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUUC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces griseus 2	-------GUUU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACU--------
Streptomyces griseus 3	-------GUUU-CGGUGGUC-AU-UGC-GUU-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUUC-AGCG-CC-GAUGGUA-CU-UCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces lividans 1	-------GUUU-CGGUGGUC-AU-AGC-GUA-G-GGGA-AACGC-CCGGUU--ACAUUUCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-AC---------
Streptomyces nodosus 1	-------GUUU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUCAG-AGCG-CC-CAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces nodosus 2	-------GUUU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUCAG-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces nodosus 3	-------GUUU-CGGUGGUC-AU-ACC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUCAU-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces nodosus 4	-------GUUU-CGGUGGUC-AU-AGC-AUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUCAU-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces purpureus 1	-------GUUU-CGGUGGUC-AU-AGC-GUU-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUUC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-GCA--------
Streptomyces rimosus 1	------UGUUU-CGGUGGUC-AU-AGC-GUU-A-GGGA-AACGC-CCGGUU--ACAUUUCGAACCCGGAAGCUAAG-CCUUUC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------ucaggggcgacgccggccgugccgccaccggccggcagucgguuuuucggcgguuaucgggugguauccggacaggggccccgcgguguggcgaaguguaguggccagguaaggucagggggcaucgucgguacguuccccacaggaggcccccggguggagguccaggagacgcgcguccagacggauc
Streptomyces rimosus 2	-------GUUU-CGGUGGUC-AU-AGC-GUU-A-GGGA-AACGC-CCGGUU--ACAUUUCGAACCCGGAAGCUAAG-CCUUUC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces roseoverticillatus 1	-------GUUU-CGGUGGUC-AU-AGC-GUU-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUUC-GACG-CC-GAUGGUA-CU-GCAUGGGGGA--CCGU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACAAU------
Streptomyces sclerotialus 1	-------GUUU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACAA-------
Streptomyces sp. 1	-------GUUU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUCCCGAACCCGGAAGCUAAG-CCUCAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces sp. 2	-------GUUU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUCAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces sp. 3	-------GUUU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUACCGAACCCGGAAGCUAAG-CCUCAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces sp. 4	-------GUUU-CGGUGGUC-AU-AGC-GUG-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUAC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptomyces violaceus 1	-------GUUU-CGGUGGUC-AU-AGC-GUU-A-GGGA-AACGC-CCGGUU--ACAUUCCGAACCCGGAAGCUAAG-CCUUUC-AGCG-CC-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAG-GA-C-G-CCGCCG---A-ACA--------
Streptosporangium roseum 1	-------GU-UACGGCGGUU-AU-GGC-GAA-G-GGGA-AACAC-CCGGUU--ACAUUCCGAACCCGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-CU-GCACCGGGGA--CGGU-GUGGGAGAGUAG-GU-C-G-CCGCCG---G-ACA--------
Symbiobacterium thermophilum 1	--------UUU-GGGUGGCG-AU-GCC-GGA-G-GGGA-U-CAC-CCGUUC--CCAUUCCGAACACGGAAGUUAAG-CCCUCC-AGGG-CC-GAAGGUA-CU-CC----GCAA-------GGGGGAGAAUAG-GU-C-G-CUGCCC---A-AAC--------
Symbiobacterium thermophilum 2	--------UUU-GGGUGGCG-AU-GCC-GGA-G-GGGA-U-CAC-CCGUUC--CCAUUCCGAACACGGAAGUUAAG-CCCUCC-AGGG-CC-GAAGGUA-CU-CC----GCAA-------GGGGGAGAAUAG-GU-C-G-CUGCCC---A-AAU--------
Symbiobacterium thermophilum 3	-----GGUUUU-GGGUGGCG-AU-GCC-GGA-G-GGGA-U-CAC-CCGUUC--CCAUUCCGAACACGGAAGUUAAG-CCCUCC-AGGG-CC-GAAGGUA-CU-CC----GCAA-------GGGGGAGAAUAG-GU-C-G-CUGCCC---A-AAC--------
Symbiobacterium thermophilum 4	--------UUU-GGGUGGCG-AU-GCC-GGA-G-GGGA-U-CAC-CCGUUC--CCAUUCCGAACACGGAAGUUAAG-CCCUCC-AGGG-CC-GAAGGUA-CU-CC----GCAA-------GGGGGAGAAUAG-GU-C-G-CUGCCC---A-AAC--------
Thermomonospora chromogena 1	-------GUUU-CGGUGGUU-AU-AGC-GGU-G-GGGA-AACAC-CCGGUC--CCAUUCCGAACCCGGUAGUUAAG-CCCGCC-AGCG-CC-GAUGGUA-CU-GCACUGGUGA--CGGU-GUGGGAGAGUAG-GU-C-G-CCGCCG---G-ACG--------
Tropheryma whipplei 1	-------GUCU-CGGGGGCA-AU-GGC-AAG-A-GGGA-AACGC-CUGGUU--ACAUUCCGAACCCAGAAGCUAAG-CCUCUU-AGCG-CU-GAUGGUA-CU-GCAGGGGGGA--CCCU-GUGGGAGAGUAA-GA-C-G-CCCCCG---G-GCU--------
Anaerorhabdus furcosa 1	--------U-C-UGGUAAUG-AU-GGC-GAA-A-UGGU-CACAC-CUGUUC--CCAUACCGAACACAGAAGUUAAG-CAUUUC-AGCG-GC-GAUUAUA-GC-UAUG--CACGC---CA-UAGUGAAACUAG-CU-C-G-UUGCCA---G-GU---------
Bacteroides capillosus 1	--------C-C-AGGUGGCU-AU-GGC-GGC-G-GUGU-UCCAC-CUCUUC--CCAUUCCGAACAGAGAAGUUAAG-CCUGUU-UGCG-CC-GACAAUA-CU-UAGA--UUUACU--UC-UAGGGAAUAUAG-GU-C-U-UCGCCA---A-UG---------
Bacteroides fragilis 1	-----------------ACU-AU-AGC-AUC-A-GGGU-UCCAC-CUCUUC--CCAUUCCGAACAGAGAAGUUAAG-CCUGAU-CACG-CC-GAUGGUA-CU-GCG---UAA------CAGUGGGAGAGUAG-GU-A-G-UCGCCG---U-U----------
Bacteroides fragilis 3	-----------------ACU-AU-AGC-AUC-A-GGGU-UCCAC-CUCUUC--CCAUUCCGAACAGAGAAGUUAAG-CCUGAU-CACG-CC-GAUGGUA-CU-GCG---UAA------CAGUGGGAGAGUAG-GU-A-G-UCGCCA---U-U----------
Bacteroides fragilis 4	-----------------ACU-AU-AGC-AUC-A-GGGU-UCCAC-CUCUUC--CCAUUCCGAACAGAGAAGUUAAG-CCUGAU-CACG-CC-GAUGGUA-CU-GCG---UAA------CAGUGGGAGAGUAG-GU-A-G-UCGCCG---U-U----------
Bacteroides fragilis 5	-----------------ACU-AU-AGC-AUC-A-GGGU-UCCAC-CUCUUC--CCAUUCCGAACAGAGAAGUUAAG-CCUGAU-CACG-CC-GAUGGUA-CU-GCG---UAA------CAGUGGGAGAGUAG-GU-A-G-UCGCCG---U-U----------
Bacteroides fragilis 6	-------------GGUGACU-AU-AGC-AUC-A-GGGU-UCCAC-CUCUUC--CCAUUCCGAACAGAGAAGUUAAG-CCUGAU-CACG-CC-GAUGGUA-CU-GCG---UAA------CAGUGGGAGAGUAG-GU-A-G-UCGCCG---U-U----------
Bacteroides fragilis 2	--------A-C-AGGUGACU-AU-AGC-AUC-A-GGGU-UCCAC-CUCUUC--CCAUUCCGAACAGAGAAGUUAAG-CCUGAU-CACG-CC-GAUGGUA-CU-GCG---UAA------CAGUGGGAGAGUAG-GU-A-G-UCGCCG---U-U----------
Porphyromonas gingivalis 2	--------U-C-AGGUGGUU-AU-AAC-GUU-G-GGGA-UCCAC-CUCUUC--CCAUUCCGAACAGAGAAGUUAAG-CCCAAC-GGUG-CC-GAUGGUA-CU-GCG---UCA------CAGUGGGAGAGUAG-GA-C-G-CCGCCG----------------
Porphyromonas gingivalis 1	-------CU-C-AGGUGGUU-AU-UAC-GUU-G-GGGA-UCCAC-CUCUUC--CCAUUCCGAACAGAGAAGUUAAG-CCCAAC-GGUG-CC-GAUGGUA-CU-GCG---UUA------UAGUGGGAGAGUAG-GA-C-G-CCGCCG---C-C----------
Bacteroides thetaiotaomicron 1	--------U-C-AGGUGACU-AU-AGC-AUC-A-GGGU-UCCAC-CUCUUC--CCAUUCCGAACAGAGAAGUUAAG-CCUGAU-CACG-CC-GAUGGUA-CU-GCG---UAA------CAGUGGGAGAGUAG-GC-A-G-UCGCCG---C-CG---------
Bacteroides veroralis 1	--------A-U-AGGUGGUU-AU-UGC-GUC-G-GGGU-UCCAC-CUCUUC--CCAUUCCGAACAGAGAAGUUAAG-CCCGUC-UGCG-CC-GAUGGUA-CU-GCA---AUGCAA---U-GCGGGAGAGUAG-GU-C-G-CCGCCU---U-C----------
Empedobacter brevis 1	-------UU-UACGGCGGCC-AU-AGC-GGC-A-GGGA-AACGC-CCGGUC--CCAUUCCGAACCCGGAAGCUAAG-CCUGCC-AGCG-CC-GAUGGUA-CU-GCACUCGUGA--GGGU-GUGGGAGAGUAG-GU-C-A-CCGCCG---A-ACAC-------
Flavobacterium hydatis 1	--------U-A-AGGUGGUU-AU-UGC-GGC-G-GGGC-UCGAC-CUCUUC--CCAUCCCGAACAGAGUAGUUAAG-CCCGCC-UGCG-CA-GAUGGUA-CU-GCA---GUUA-----U-GUGGGAGAGUAU-GU-C-G-UCGCCU---U-UC---------
Flavobacterium johnsoniae 1	--------U-C-UGGUGGCG-AU-AGC-AGA-G-AGGU-CACAC-CCGUUC--CCAUGCCGAACACGGAAGUUAAG-UUCUCU-AGCG-CC-GAUGGUA-GU-GUGGACUUU---GUCC-CUGUGAGAGUAG-GA-C-G-UUGCCA---G-GC---------
Flectobacillus major 1	--------G-UAUGGAGCCG-AU-AGG-ACU-G-GU-G-UUCAC-UCUUCC--CCAUCUCGAACAGAGUAGUUAAG-CCCAGU-ACCG-UU-GAUGAUA-CU-GCA---AUCACA---U-GCGGGAAAGCAA-CC-A-A-GCUCCA---A-CUC--------
Flexibacter sp. 1	--------U-C-UGGUGACG-AU-GGC-GGA-G-GGGA-CACAC-CCGUUC--CCAUACCGAACACGGCCGUUAAG-CCCUCC-AGCG-CC-GAUGGUA-CU-UGCCCCGCAG--GGAG-CCGGGAGAGUAG-GA-C-G-UUGCCA---G-GU---------
Pedobacter heparinus 1	-------UU-U-AGGUGCCU-AU-AUC-GGU-G-GUG--UCCAC-CUCUUC--CCAUUCCGAACAGAGAAGUUAAG-CCCACC-AGAG-CC-GAUGGUA-CU-GCGG--UAAC----AC-GUGGGAGAGUAG-GU-C-G-GUGCCA---A-AUC--------
Saprospira grandis 1	------CUUCU-CGGUGGCCUAU-AGC-AGC-A-GGGA-A-CGC-CCGGAC--CCAUUCCGAACCCGGAAGCUAAG-CCUGCU-AACG-CU-GAUGGUA-CU-GCAACCGGGA--GGUU-GUGGGAGAGUAA-GA-A-A-CCGCCG---A-CAA--------
Spirosoma sp. 1	-------AG-U-UGUGUAGU-UU--AG-GCG-G-GGUG-UUCAC-CUCUA---CCAUUUCGAACAGAGCCGUUAAG-CCCCGU-ACUG-CC-GAUGGUA-CU-GCU---GUCAUA---A-GCGGGAGAGUAG-G--A-A-GAUGCA---C-CU---------
Chlorobium limicola 1	--------C-AACGGCGACA-AU--UC-CCU-U-GGUG-AACAC-CUCUUC--CCAUUCCGAACAGAGUCGUUAAG-CCAAGG-AGAG-CC-GAUGGUA-CU-GC----UUCAUU-----GCGGGAGAGUAG-GU-C-G-UCGCCG---U-GU---------
Chlorobium tepidum 1	----------A-CGGCGACU-AU-AUC-CCU---GGUG-UUCAC-CUCUUC--CCAUUCCGAACAGAGUCGUUAAG-CCCAGG-AGAG-CC-GAUGGUA-CU-GC----UUUAUU-----GCGGGAGAGUAG-GU-C-G-UCGCCG---A-GU---------
Prosthecochloris aestuarii 1	-------UU-A-CGGCGAUU-AU-AUC-CCA---GGUG-UUCAC-CUCUUC--CCAUUUCGAACAGAGUCGUUAAG-CCCUGG-UGAG-CC-GAUGGUA-CU-GC----GUUA-------GCGGGAGAGUAG-GU-C-G-UCGCCG---U-AUU--------
Chlorobium limicola 2	-------CC-A-CGGCGACU-AU-AUC-CCU---GGUG-UUCAC-CUCUUC--CCAUUCCGAACAGAGUCGUUAAG-CCCAGG-AGAG-CC-GAUGGUA-CU-GC----UUUAUU-----GCGGGAGAGUAG-GU-C-G-UCGCCG---A-GU---------
Chlorobium phaeobacteroides 1	--------C-UACGGCGACU-UU-UUC-CCA---GGUG-AUCAC-CUCUUC--CCAUUCCGAACAGAGUCGUUAAG-CCCUGG-AGAG-CC-GAUGGUA-CU-GC----UUCACU-----GCGGGAGAGUAG-GU-C-G-UCGCCG---A-U----------
Leptospira interrogans 1	--------C-C-CGGUGACU-AU-AGA-GAG-A-GGGC-CACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCUCUC-AUCG-CU-GAUGGUA-CU-AUGUGGUUCG--CUGC-AUGGGAGAGUAG-GA-C-G-UUGCCG---G-GU---------
Leptospira biflexa 1	--------C-C-UGGUGAUU-AU-GGA-GAG-A-AGGC-CAUAC-CCGUUC--CCAUUCCGAACACGGAAGUCAAG-CUUCUC-AUCG-CC-GAUGGUA-CU-AUUGGGUUCG--CUCA-AUGGGAGAGUAG-GA-C-A-UUGCCG---G-GU---------
Treponema denticola 1	----------C-AGGUGGCC-AU-AGU-GGA-G-AGGU-AAUAC-CCGUUC--CCAUCCCGAACACGGAAGUCAAG-CUCUCU-UACG-CC-GAUGAUA-CU-GCU---GAUCA----A-GUGGGAAAGUAG-GA-U-G-CUGCCU---G-GC---------
Leptospira interrogans 2	--------C-C-CGGUGACU-AU-AGA-GAG-A-GGGC-CACAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CCUCUC-AUCG-CU-GAUGGUA-CU-AUGUGGUUCG--CUGC-AUGGGAGAGUAG-GA-C-G-UUGCCG---G-GUUUU------
Spirochaeta aurantia 1	--------C-C-UGGUGAUC-AU-AGC-GAA-G-AGGU-CCCAC-CCGUUC--CCAUCCCGAACACGGAAGUUAAG-CUCUUC-AGCG-CC-GAUGGUA-CU-GC----UAUU-------GCGGGAGAGUAG-GU-C-G-UCGCCA---G-GCU--------
Borrelia burgdorferi 1	-------CC-C-UGGUGGUU-AA-AGA-AAA-G-AGGA-AACAC-CUGUUA--UCAUUCCGAACACAGAAGUUAAG-CUCUUA-UUCG-CU-GAUGGUA-CU-GCG---AGUU-----C-GCGGGAGAGUAG-GU-U-A-UUGCCA---G-GG---------